RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 APC2O95996 2303 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 MOXD2PA6NHM9 499 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 FOXN1O15353 648 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 MAGEB2O15479 319 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 SERPINC1P01008 464 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 CCND3P30281 292 aaPredicted RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 BMT2Q1RMZ1 405 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 KMT5BQ4FZB7 885 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 XKR9Q5GH70 373 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 TMEM174Q8WUU8 243 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 PLIN2Q99541 437 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 REEP2Q9BRK0 252 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 PANK4Q9NVE7 773 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 PCDHA2Q9Y5H9 948 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 TNNT3P45378 269 aaPredicted RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 COASYQ13057 564 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 CCSAPQ6IQ19 270 aaPredicted RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 FAM43BQ6ZT52 329 aaPredicted RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 ZNF354CQ86Y25 554 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 GRAMD1CQ8IYS0 662 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 PIGOQ8TEQ8 1089 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 SPIRE2Q8WWL2 714 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 GLG1Q92896 1179 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 PAK6Q9NQU5 681 aaPredicted RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 TELO2Q9Y4R8 837 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 SCN10AQ9Y5Y9 1956 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 ZBTB42B2RXF5 422 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 ELNP15502 786 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 ERCC5P28715 1186 aaPredicted RBP9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 PURAQ00577 322 aaKnown RBP9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 EMC2Q15006 297 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 STXBP4Q6ZWJ1 553 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 LINC01465Q8N7H1 131 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 XPNPEP3Q9NQH7 507 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 DYNC1LI2O43237 492 aaPredicted RBP9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 PLS3P13797 630 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 NCKAP1LP55160 1127 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 SNRPFP62306 86 aaKnown RBP9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 CDC42EP1Q00587 391 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 TMEM63BQ5T3F8 832 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 FBXO46Q6PJ61 603 aaPredicted RBP9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 CEP170P1Q96L14 293 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 PARVGQ9HBI0 331 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 NRCAMQ92823 1304 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 MYH11P35749 1972 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 POU5F1BQ06416 359 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 MFSD10Q14728 455 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 PPP2R5AQ15172 486 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 RNF180Q86T96 592 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 ARMC5Q96C12 935 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 NFKBIZQ9BYH8 718 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 BLZF1Q9H2G9 400 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 PRDM10Q9NQV6 1147 aa9.3□□□□□ -0.92
PTPDC1-201ENST00000288976 H3BRB1 525 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 FAM13AO94988 1023 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 HARSP12081 509 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 PSEN2P49810 448 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 TRIM32Q13049 653 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 UTP14CQ5TAP6 766 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 SYCP3Q8IZU3 236 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 RETREG2Q8NC44 543 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 KAT2BQ92831 832 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 TUT1Q9H6E5 874 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 CGNQ9P2M7 1197 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 GNAT1P11488 350 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 RDXP35241 583 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 ARL2P36404 184 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 NFIL3Q16649 462 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 EPM2AIP1Q7L775 607 aaPredicted RBP9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 RNF169Q8NCN4 708 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 SLC7A3Q8WY07 619 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 DHTKD1Q96HY7 919 aaPredicted RBP9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 STRA6Q9BX79 667 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 IKBKBO14920 756 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 ASAP2O43150 1006 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 HIP1RO75146 1068 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 POLGP54098 1239 aaPredicted RBP9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 MAPK7Q13164 816 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 SPOUT1Q5T280 376 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 IER5Q5VY09 327 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 ZNHIT6Q9NWK9 470 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 PHF24Q9UPV7 400 aa9.29□□□□□ -0.92
PTPDC1-201ENST00000288976 C22orf31O95567 290 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 ZNF286BP0CG31 522 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 NFRKBQ6P4R8 1299 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 PPP4R3CPQ6ZMV5 832 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 GUF1Q8N442 669 aaKnown RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 NTPCRQ9BSD7 190 aaKnown RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 RWDD2AQ9UIY3 292 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 TRPC6Q9Y210 931 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 MBLAC1A4D2B0 266 aaPredicted RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 MYL3P08590 195 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 MXD4Q14582 209 aaPredicted RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 FAM26FQ5R3K3 315 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 PLA2G4FQ68DD2 849 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 LHX8Q68G74 356 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 ARRDC4Q8NCT1 418 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 FAM200AQ8TCP9 573 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 LARSQ9P2J5 1176 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms