RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 WDR5P61964 334 aaKnown RBP10.29□□□□□ -0.76
HMGN1-201ENST00000288344 IGBP1P78318 339 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 MRPS6P82932 125 aaKnown RBP10.29□□□□□ -0.76
HMGN1-201ENST00000288344 LSM11P83369 360 aaKnown RBP eCLIP10.29□□□□□ -0.76
HMGN1-201ENST00000288344 PDIA5Q14554 519 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 CALCRLQ16602 461 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 ECM1Q16610 540 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 TTC38Q5R3I4 469 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 LARP1BQ659C4 914 aaKnown RBP10.29□□□□□ -0.76
HMGN1-201ENST00000288344 BANK1Q8NDB2 785 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 LINC01599Q8WXQ3 324 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 FAM167AQ96KS9 214 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 EIF2AK1Q9BQI3 630 aaKnown RBP10.29□□□□□ -0.76
HMGN1-201ENST00000288344 MMTAG2Q9BU76 263 aaKnown RBP10.29□□□□□ -0.76
HMGN1-201ENST00000288344 TMX1Q9H3N1 280 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 CDY2AQ9Y6F7 541 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 TMEM265A0A087WTH1 108 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 C3orf80F5H4A9 247 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 BAG4O95429 457 aaKnown RBP10.28□□□□□ -0.76
HMGN1-201ENST00000288344 CTSHP09668 335 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 LINC00271P0C7V0 271 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 MYOGP15173 224 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 SYT1P21579 422 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 TXKP42681 527 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 NPEPPSP55786 919 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 DEFB103AP81534 67 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 HTRA4P83105 476 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-201ENST00000288344 IER5Q5VY09 327 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 EFCAB12Q6NXP0 572 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 FAM43BQ6ZT52 329 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-201ENST00000288344 CATSPER3Q86XQ3 398 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 TOP1MTQ969P6 601 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 DYDC2Q96IM9 177 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 GUCD1Q96NT3 240 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 SH2D3AQ9BRG2 576 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 POLR3CQ9BUI4 534 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-201ENST00000288344 ZSWIM4Q9H7M6 989 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 RC3H2Q9HBD1 1191 aaKnown RBP10.28□□□□□ -0.76
HMGN1-201ENST00000288344 XPNPEP1Q9NQW7 623 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 CYP26B1Q9NR63 512 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 CEP131Q9UPN4 1083 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 SMC3Q9UQE7 1217 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 MTMR6Q9Y217 621 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 SAMM50Q9Y512 469 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 SLC4A7Q9Y6M7 1214 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 MUC3AQ02505 3323 aa10.28□□□□□ -0.76
HMGN1-201ENST00000288344 MED24O75448 989 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 GJB5O95377 273 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 OR52Z1P0C646 297 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 DNAJB2P25686 324 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 RPA1P27694 616 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 PRPHP41219 470 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 CRYBB1P53674 252 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-201ENST00000288344 FAM189BP81408 668 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 ATP2C1P98194 919 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-201ENST00000288344 IKBKEQ14164 716 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 CTTNQ14247 550 aaKnown RBP10.27□□□□□ -0.77
HMGN1-201ENST00000288344 DSC3Q14574 896 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 RILPL1Q5EBL4 403 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 Q7L0L9 218 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 TMCO2Q7Z6W1 182 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-201ENST00000288344 HERC6Q8IVU3 1022 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 USP38Q8NB14 1042 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 KCNK17Q96T54 332 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 LXNQ9BS40 222 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 ERVK-5Q9HDB9 667 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 PADI3Q9ULW8 664 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 NOC2LQ9Y3T9 749 aaKnown RBP10.27□□□□□ -0.77
HMGN1-201ENST00000288344 PPME1Q9Y570 386 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 PCDHA11Q9Y5I1 949 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 TRPV2Q9Y5S1 764 aa10.27□□□□□ -0.77
HMGN1-201ENST00000288344 A0A087WWV3 80 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 LAD1O00515 517 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 MGEA5O60502 916 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 EFCAB14O75071 495 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 VTNP04004 478 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 GHRP10912 638 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 ACTN1P12814 892 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 ATP2A2P16615 1042 aaKnown RBP10.26□□□□□ -0.77
HMGN1-201ENST00000288344 ATP2B1P20020 1258 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 MUTP22033 750 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 YWHABP31946 246 aaKnown RBP10.26□□□□□ -0.77
HMGN1-201ENST00000288344 TECP42680 631 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 RARRES1P49788 294 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 GPC3P51654 580 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 CLCN3P51790 818 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 RABGGTBP53611 331 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 TMEM62Q0P6H9 643 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 RESTQ13127 1097 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 PTPAQ15257 358 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 HYIQ5T013 277 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 PLA2G4FQ68DD2 849 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 TSHZ1Q6ZSZ6 1077 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 RSPH3Q86UC2 560 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 LRRC71Q8N4P6 559 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 NEK9Q8TD19 979 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 SEPT8Q92599 483 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 APBB2Q92870 758 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 ZNF689Q96CS4 500 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms