RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TMEM179Q6ZVK1 233 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 ZC3H18Q86VM9 953 aaKnown RBP13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 CEP70Q8NHQ1 597 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 GDAP1Q8TB36 358 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 REEP2Q9BRK0 252 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 ARHGAP20Q9P2F6 1191 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 SLC4A7Q9Y6M7 1214 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 A0A087X0T9 212 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 ZBED4O75132 1171 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 FAM228BP0C875 321 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 GAP43P17677 238 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 TNS2Q63HR2 1409 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 TRAPPC11Q7Z392 1133 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 FMO2Q99518 471 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 RNF14Q9UBS8 474 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 ABCB11O95342 1321 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 FAM237AA0A1B0GTK4 181 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 LRRIQ4A6NIV6 560 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 C21orf2O43822 256 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 MSH2P43246 934 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 MXI1P50539 228 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 PDIA5Q14554 519 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 AOC3Q16853 763 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 CYP4F22Q6NT55 531 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 CASC4Q6P4E1 433 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 KIAA0895Q8NCT3 520 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 PIP4K2CQ8TBX8 421 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 HDAC7Q8WUI4 952 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 DNAJC7Q99615 494 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 EIF2AK1Q9BQI3 630 aaKnown RBP13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 PACSIN1Q9BY11 444 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 TMOD4Q9NZQ9 345 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 FAM208AQ9UK61 1670 aaKnown RBP13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 LIG4P49917 911 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 IL9RQ01113 521 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 DR1Q01658 176 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 CDC42EP5Q6NZY7 148 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 SH3RF1Q7Z6J0 888 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 PBKQ96KB5 322 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 DUSP9Q99956 384 aaKnown RBP13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 MLXIPLQ9NP71 852 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 TMEM51Q9NW97 253 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 PLAGL2Q9UPG8 496 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 NAALADL2Q58DX5 795 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 PICK1Q9NRD5 415 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 RSPH10B2B2RC85 870 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 RSPH10BP0C881 870 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 TMOD1P28289 359 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 COPB2P35606 906 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 TRPC3Q13507 836 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 C1orf112Q9NSG2 853 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 LTN1O94822 1766 aa13.5□□□□□ -0.25
SLC6A1-201ENST00000287766 GPR75-ASB3A0A0A6YYF3 556 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 ZSCAN5CA6NGD5 496 aaPredicted RBP13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 ACSL3O95573 720 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 IRX4P78413 519 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 SLC18A3Q16572 532 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 LGSNQ5TDP6 509 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 ZNF354CQ86Y25 554 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 TMEM139Q8IV31 216 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 PALM2Q8IXS6 379 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 HVCN1Q96D96 273 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 POLLQ9UGP5 575 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 CREB3O43889 395 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 ZWINTO95229 277 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 UCHL3P15374 230 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 SSTR3P32745 418 aaPredicted RBP13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 PTK2Q05397 1052 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 BSPRYQ5W0U4 402 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 PARP9Q8IXQ6 854 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 ERGIC2Q96RQ1 377 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 NOC2LQ9Y3T9 749 aaKnown RBP13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 HMGB1P1B2RPK0 211 aaPredicted RBP13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 DMP1Q13316 513 aaPredicted RBP13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 PPP2R5CQ13362 524 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 PPP2R5EQ16537 467 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 HAUS1Q96CS2 278 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 CEP170P1Q96L14 293 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 NT5C1BQ96P26 610 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 SH3GL3Q99963 347 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 WDR11Q9BZH6 1224 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 Q9H521 79 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 MYO1FO00160 1098 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 NDUFB10O96000 172 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 MAGOHP61326 146 aaKnown RBP13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 KCNK18Q7Z418 384 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 P3H4Q92791 437 aa13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 TYW1Q9NV66 732 aaKnown RBP13.49□□□□□ -0.25
SLC6A1-201ENST00000287766 ADAMTS3O15072 1205 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 SLC16A4O15374 487 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 SART1O43290 800 aaKnown RBP13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 EVI5O60447 810 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 NPR1P16066 1061 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 DEPTORQ8TB45 409 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 WDR91A4D1P6 747 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms