RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ADM5C9JUS6 153 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 SETQ01105 290 aaPredicted RBP19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 ASTE1Q2TB18 679 aaPredicted RBP19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 TKFCQ3LXA3 575 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 B3GNT9Q6UX72 402 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 RNF207Q6ZRF8 634 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 RRAGAQ7L523 313 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 SPATS2Q86XZ4 545 aaKnown RBP19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 ARL8AQ96BM9 186 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 SH2D3AQ9BRG2 576 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 RNF146Q9NTX7 359 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 RNF181Q9P0P0 153 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 COL11A1P12107 1806 aaPredicted RBP19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 PARP14Q460N5 1801 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 SBF1O95248 1867 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 CXCR5P32302 372 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 BAATQ14032 418 aaPredicted RBP19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 PGM5Q15124 567 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 SNRNP48Q6IEG0 339 aaKnown RBP19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 B4GALNT4Q76KP1 1039 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 BAP1Q92560 729 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 RMDN3Q96TC7 470 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 LXNQ9BS40 222 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 TUFT1Q9NNX1 390 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 GDF3Q9NR23 364 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 RBM12Q9NTZ6 932 aaKnown RBP19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 DHX15O43143 795 aaKnown RBP19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 USP2O75604 605 aaPredicted RBP19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 FKBP3Q00688 224 aaKnown RBP19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 KLHDC7AQ5VTJ3 777 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 PDXDC1Q6P996 788 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 ZIM3Q96PE6 472 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 RLFQ13129 1914 aa19.98■□□□□ 0.79
PDLIM3-201ENST00000284767 RBAK-RBAKDNI3L0D1 243 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 ZEB2O60315 1214 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 ATP9AO75110 1047 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 FOXR2Q6PJQ5 311 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 KSR1Q8IVT5 923 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 TEX2Q8IWB9 1127 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 REPS2Q8NFH8 660 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 PHIPQ8WWQ0 1821 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 LIG3P49916 1009 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 PAK2Q13177 524 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 MTMR1Q13613 665 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 TMEM132BQ14DG7 1078 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 EMC10Q5UCC4 262 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 PCNX4Q63HM2 1172 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 MREGQ8N565 214 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 PSMB7Q99436 277 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 SALL4Q9UJQ4 1053 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 UBIAD1Q9Y5Z9 338 aa19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 DICER1Q9UPY3 1922 aaKnown RBP19.97■□□□□ 0.79
PDLIM3-201ENST00000284767 NCK2O43639 380 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 YBX3P16989 372 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 CCDC40Q4G0X9 1142 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 KDM7AQ6ZMT4 941 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 C1orf186Q6ZWK4 172 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 NUCKS1Q9H1E3 243 aaKnown RBP19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 AGO4Q9HCK5 861 aaKnown RBP19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 SMARCAL1Q9NZC9 954 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 EHD2Q9NZN4 543 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 ZNF214Q9UL59 606 aaPredicted RBP19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 COL4A3BPQ9Y5P4 624 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 STK24Q9Y6E0 443 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 TMEM150BA6NC51 233 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 TBCAO75347 108 aaKnown RBP19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 NMT1P30419 496 aaKnown RBP19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 DSG3P32926 999 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 GHRHRQ02643 423 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 VGLL4Q14135 290 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 EPHA7Q15375 998 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 MAEAQ7L5Y9 396 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 IQCKQ8N0W5 287 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 PDCD2LQ9BRP1 358 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 LUC7LQ9NQ29 371 aaKnown RBP19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 PXMP2Q9NR77 195 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 SAMM50Q9Y512 469 aa19.96■□□□□ 0.79
PDLIM3-201ENST00000284767 TESPA1A2RU30 521 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 GRID2IPA4D2P6 1211 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 GCNT3O95395 438 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 MRPS25P82663 173 aaKnown RBP19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 ADAM9Q13443 819 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 PLS1Q14651 629 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 ZC2HC1CQ53FD0 456 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 SWT1Q5T5J6 900 aaKnown RBP19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 CFAP58Q5T655 872 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 MIER3Q7Z3K6 550 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 CACNA2D4Q7Z3S7 1137 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 CD302Q8IX05 232 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 C1orf131Q8NDD1 294 aaKnown RBP19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 AFG3L2Q9Y4W6 797 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 NDUFAB1O14561 156 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 GFPT1Q06210 699 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 ARHGEF16Q5VV41 709 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 EPM2AIP1Q7L775 607 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 SYN2Q92777 582 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 CEP89Q96ST8 783 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 RIT2Q99578 217 aa19.95■□□□□ 0.78
PDLIM3-201ENST00000284767 COG2Q14746 738 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms