RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CRLF3Q8IUI8 442 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 TRIM59Q8IWR1 403 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 MYRIPQ8NFW9 859 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 TBCKQ8TEA7 893 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 PGBD4Q96DM1 585 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 ZFP42Q96MM3 310 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 NLRP4Q96MN2 994 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 UIMC1Q96RL1 719 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 EGFL8Q99944 293 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 EMILIN3Q9NT22 766 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 DDX56Q9NY93 547 aaKnown RBP4.34□□□□□ -1.71
SCN3A-201ENST00000283254 STK38LQ9Y2H1 464 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 RFX7Q2KHR2 1363 aa4.34□□□□□ -1.71
SCN3A-201ENST00000283254 ARAP3Q8WWN8 1544 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 A0A0D9SFI3 127 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 ATP5HO75947 161 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 EIF2AK2P19525 551 aaKnown RBP4.34□□□□□ -1.72
SCN3A-201ENST00000283254 MTMR1Q13613 665 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 KRT24Q2M2I5 525 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 IRAK1BP1Q5VVH5 260 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 EFL1Q7Z2Z2 1120 aaKnown RBP4.34□□□□□ -1.72
SCN3A-201ENST00000283254 OOSP2Q86WS3 158 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 SEPT12Q8IYM1 358 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 SDR42E1Q8WUS8 393 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 DEPDC1BQ8WUY9 529 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 UCMAQ8WVF2 138 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 FAM20AQ96MK3 541 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 FMO2Q99518 471 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 KATNAL1Q9BW62 490 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 TRIM55Q9BYV6 548 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 ING2Q9H160 280 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 TJP2Q9UDY2 1190 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 CDC23Q9UJX2 597 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 PALD1Q9ULE6 856 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 PODXLO00592 558 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 CTNND1O60716 968 aaKnown RBP4.34□□□□□ -1.72
SCN3A-201ENST00000283254 RLBP1P12271 317 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 GFAPP14136 432 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 CD58P19256 250 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 SERPINB10P48595 397 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 SNCBQ16143 134 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 RASIP1Q5U651 963 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 G2E3Q7L622 706 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 PYROXD1Q8WU10 500 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 TSPAN17Q96FV3 270 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 TIPINQ9BVW5 301 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 USP44Q9H0E7 712 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 COG4Q9H9E3 785 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 ACTR5Q9H9F9 607 aaPredicted RBP4.34□□□□□ -1.72
SCN3A-201ENST00000283254 MOSPD1Q9UJG1 213 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 ARHGAP26Q9UNA1 814 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 PFASO15067 1338 aa4.34□□□□□ -1.72
SCN3A-201ENST00000283254 C5orf58C9J3I9 102 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF263O14978 683 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 NPM3O75607 178 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 LMNAP02545 664 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PHKA1P46020 1223 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 HPCAP84074 193 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 TKFCQ3LXA3 575 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 BTBD8Q5XKL5 378 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 HEATR6Q6AI08 1181 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 CAPN12Q6ZSI9 719 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 SCN4BQ8IWT1 228 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 EAF2Q96CJ1 260 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PIGSQ96S52 555 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 LGR6Q9HBX8 967 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 RPRD1BQ9NQG5 326 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ADAM22Q9P0K1 906 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 KIF17Q9P2E2 1029 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 TPRP12270 2363 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PNMA6EA0A0J9YXQ4 647 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 CFAP69A5D8W1 941 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 POC1B-GALNT4F8VUJ3 575 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 LRRN2O75325 713 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 SUPT3HO75486 399 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 HIST1H2AGP0C0S8 130 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 HIST1H2ADP20671 130 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 CAPRIN1Q14444 709 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF568Q3ZCX4 644 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ABHD8Q96I13 439 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 HIST1H2AHQ96KK5 128 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 HIST1H2AJQ99878 128 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 H2AFJQ9BTM1 129 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 TMEM60Q9H2L4 133 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ZC4H2Q9NQZ6 224 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 KCND2Q9NZV8 630 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 HDAC6Q9UBN7 1215 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 APOBEC2Q9Y235 224 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ZHX2Q9Y6X8 837 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 KDM6AO15550 1401 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 FLT1P17948 1338 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 CPB1P15086 417 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PCSK1P29120 753 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 HDAC4P56524 1084 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 RASGRF1Q13972 1273 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 FLOT2Q14254 428 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 SYTL3Q4VX76 610 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 AFG1LQ8WV93 481 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 LPAR1Q92633 364 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 RNF146Q9NTX7 359 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms