RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 KIFAP3Q92845 792 aa12.55□□□□□ -0.4
XRCC4-201ENST00000282268 ZNF668Q96K58 619 aaPredicted RBP12.55□□□□□ -0.4
XRCC4-201ENST00000282268 IFT74Q96LB3 600 aa12.55□□□□□ -0.4
XRCC4-201ENST00000282268 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
XRCC4-201ENST00000282268 PDLIM7Q9NR12 457 aa12.55□□□□□ -0.4
XRCC4-201ENST00000282268 IFNKQ9P0W0 207 aa12.55□□□□□ -0.4
XRCC4-201ENST00000282268 SEL1LQ9UBV2 794 aa12.55□□□□□ -0.4
XRCC4-201ENST00000282268 A6NJR5 290 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 ZBTB42B2RXF5 422 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 TULP1O00294 542 aaPredicted RBP12.54□□□□□ -0.4
XRCC4-201ENST00000282268 MYCP01106 439 aaPredicted RBP12.54□□□□□ -0.4
XRCC4-201ENST00000282268 HMGCRP04035 888 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 RARBP10826 455 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 NPTX2P47972 431 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 CPT1AP50416 773 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 ZNF75DP51815 510 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 IRF5Q13568 498 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 FSCN1Q16658 493 aaKnown RBP12.54□□□□□ -0.4
XRCC4-201ENST00000282268 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 COBLL1Q53SF7 1204 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 CENPPQ6IPU0 288 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 STXBP4Q6ZWJ1 553 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 DRC7Q8IY82 874 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 FIZ1Q96SL8 496 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 CEP89Q96ST8 783 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 PPP1R16BQ96T49 567 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 DHX33Q9H6R0 707 aaKnown RBP12.54□□□□□ -0.4
XRCC4-201ENST00000282268 OLFML3Q9NRN5 406 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 MAGEC2Q9UBF1 373 aaPredicted RBP12.54□□□□□ -0.4
XRCC4-201ENST00000282268 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 THSD7BQ9C0I4 1608 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 LRRIQ4A6NIV6 560 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 CLIC2O15247 247 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 SEPT4O43236 478 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 DUSP11O75319 330 aaKnown RBP12.54□□□□□ -0.4
XRCC4-201ENST00000282268 MAFO75444 373 aaPredicted RBP12.54□□□□□ -0.4
XRCC4-201ENST00000282268 HOXD13P35453 343 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 CLCN3P51790 818 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 SMTNP53814 917 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 PPFIA1Q13136 1202 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 KNOP1Q1ED39 458 aaKnown RBP12.54□□□□□ -0.4
XRCC4-201ENST00000282268 ZNF484Q5JVG2 852 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 GNASQ5JWF2 1037 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 EFCAB12Q6NXP0 572 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 HAUS6Q7Z4H7 955 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 SPC24Q8NBT2 197 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 ZNF507Q8TCN5 953 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 NOC3LQ8WTT2 800 aaKnown RBP12.54□□□□□ -0.4
XRCC4-201ENST00000282268 KCTD10Q9H3F6 313 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 SPC25Q9HBM1 224 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 TAB2Q9NYJ8 693 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 NRBP1Q9UHY1 535 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 PTCH2Q9Y6C5 1203 aa12.54□□□□□ -0.4
XRCC4-201ENST00000282268 KCNJ18B7U540 433 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 PES1O00541 588 aaKnown RBP12.53□□□□□ -0.4
XRCC4-201ENST00000282268 CALUO43852 315 aaPredicted RBP12.53□□□□□ -0.4
XRCC4-201ENST00000282268 INHAP05111 366 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 GJB1P08034 283 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 SRGAP2CP0DJJ0 459 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 GLRA2P23416 452 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 KLRC1P26715 233 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 PSEN2P49810 448 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 UBASH3AP57075 661 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 KCNJ12Q14500 433 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 MFSD10Q14728 455 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 GRIK4Q16099 956 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 KIAA0753Q2KHM9 967 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 DEPTORQ8TB45 409 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 SH3TC2Q8TF17 1288 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 PRPF31Q8WWY3 499 aaKnown RBP12.53□□□□□ -0.4
XRCC4-201ENST00000282268 NAP1L5Q96NT1 182 aaPredicted RBP12.53□□□□□ -0.4
XRCC4-201ENST00000282268 XPO4Q9C0E2 1151 aaKnown RBP12.53□□□□□ -0.4
XRCC4-201ENST00000282268 XPNPEP3Q9NQH7 507 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 SETD4Q9NVD3 440 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 SUCLA2Q9P2R7 463 aaPredicted RBP12.53□□□□□ -0.4
XRCC4-201ENST00000282268 Q9Y3F1 56 aa12.53□□□□□ -0.4
XRCC4-201ENST00000282268 MYH9P35579 1960 aaKnown RBP12.53□□□□□ -0.4
XRCC4-201ENST00000282268 ARID2Q68CP9 1835 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 WDR81Q562E7 1941 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 LOXHD1Q8IVV2 1947 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 DENND3A2RUS2 1198 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 EIF3DO15371 548 aaKnown RBP eCLIP12.52□□□□□ -0.4
XRCC4-201ENST00000282268 C22orf31O95567 290 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 GNRH1P01148 92 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 ZNF18P17022 549 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 ARL2P36404 184 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 NCKAP1LP55160 1127 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 TCP11X2Q5H9J9 407 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 CDKAL1Q5VV42 579 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 RHPN2Q8IUC4 686 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 KAT2BQ92831 832 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 ACCSQ96QU6 501 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 VPS16Q9H269 839 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 THAP9Q9H5L6 903 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 USP20Q9Y2K6 914 aa12.52□□□□□ -0.4
XRCC4-201ENST00000282268 ZMYM2Q9UBW7 1377 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 TISP43B9A030 160 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 PTMAP06454 111 aaKnown RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 SMIM10L2AP0DMW4 78 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms