RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 NT5C3AQ9H0P0 336 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 POLR3FQ9H1D9 316 aaPredicted RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 TFIP11Q9UBB9 837 aaKnown RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 MSRAQ9UJ68 235 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 PADI3Q9ULW8 664 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 DNM3Q9UQ16 869 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 PPME1Q9Y570 386 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 COL4A3BPQ9Y5P4 624 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 A0A087WZ62 844 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 LRRIQ4A6NIV6 560 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 GPR182O15218 404 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 SPTLC2O15270 562 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 TLL1O43897 1013 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 GAS2O43903 313 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 GPR32O75388 356 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 CSDE1O75534 798 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 KRT18P05783 430 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 ZSCAN20P17040 1043 aaPredicted RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 MUTP22033 750 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 SFPQP23246 707 aaKnown RBP eCLIP7.26□□□□□ -1.25
CD44-204ENST00000279452 LONP1P36776 959 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 PBX2P40425 430 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 PHKA2P46019 1235 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 ME1P48163 572 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 CDC42EP1Q00587 391 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 DNM1Q05193 864 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 GRIN1Q05586 938 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 RAD51AP2Q09MP3 1159 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 LAMTOR4Q0VGL1 99 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 MKRN4PQ13434 485 aaPredicted RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 GPNMBQ14956 572 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 KARSQ15046 597 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 RAB30Q15771 203 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 ECM1Q16610 540 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 TCTN1Q2MV58 587 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 LRIT3Q3SXY7 679 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 ZNF697Q5TEC3 545 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 PADI6Q6TGC4 694 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.26□□□□□ -1.25
CD44-204ENST00000279452 CATSPER4Q7RTX7 472 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 KRI1Q8N9T8 703 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 RNF149Q8NC42 400 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 RNF169Q8NCN4 708 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 MCPH1Q8NEM0 835 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 TMEM40Q8WWA1 233 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 PRPF31Q8WWY3 499 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 CLIC6Q96NY7 704 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 FDXACB1Q9BRP7 624 aaPredicted RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 FTHL17Q9BXU8 183 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 CSRNP2Q9H175 543 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 NKX2-4Q9H2Z4 354 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 DHX33Q9H6R0 707 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 AGO3Q9H9G7 860 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 CDHR5Q9HBB8 845 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 GPRC5CQ9NQ84 441 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 CCDC39Q9UFE4 941 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 FBXO2Q9UK22 296 aaPredicted RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 DBR1Q9UK59 544 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 LRFN2Q9ULH4 789 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 ST3GAL5Q9UNP4 418 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 PIN4Q9Y237 131 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 NOC2LQ9Y3T9 749 aaKnown RBP7.26□□□□□ -1.25
CD44-204ENST00000279452 ATP6V1DQ9Y5K8 247 aa7.26□□□□□ -1.25
CD44-204ENST00000279452 IGKV6-21A0A0C4DH24 114 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 INO80B-WBP1J3KQ70 363 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 ERLIN2O94905 339 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 EYA4O95677 639 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 XRCC6P12956 609 aaKnown RBP eCLIP7.25□□□□□ -1.25
CD44-204ENST00000279452 DARSP14868 501 aaKnown RBP7.25□□□□□ -1.25
CD44-204ENST00000279452 MYOGP15173 224 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 PLCG1P19174 1290 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 EIF4BP23588 611 aaKnown RBP7.25□□□□□ -1.25
CD44-204ENST00000279452 DNAJB2P25686 324 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 NASPP49321 788 aaPredicted RBP7.25□□□□□ -1.25
CD44-204ENST00000279452 FXR1P51114 621 aaKnown RBP eCLIP7.25□□□□□ -1.25
CD44-204ENST00000279452 KRT85P78386 507 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 SMAD3P84022 425 aaKnown RBP7.25□□□□□ -1.25
CD44-204ENST00000279452 GRB10Q13322 594 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 MXD4Q14582 209 aaPredicted RBP7.25□□□□□ -1.25
CD44-204ENST00000279452 SLC39A14Q15043 492 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 PTPAQ15257 358 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 PPP2R2DQ66LE6 453 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 ZNF410Q86VK4 478 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 FAM228AQ86W67 206 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 HERC6Q8IVU3 1022 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 ZBTB8OSQ8IWT0 167 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 ZNF710Q8N1W2 664 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 LINC01465Q8N7H1 131 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 ASAP3Q8TDY4 903 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 SYMPKQ92797 1274 aaKnown RBP7.25□□□□□ -1.25
CD44-204ENST00000279452 TIFAQ96CG3 184 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 VWCEQ96DN2 955 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 CEP89Q96ST8 783 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 YME1L1Q96TA2 773 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 ADAM2Q99965 735 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 MMTAG2Q9BU76 263 aaKnown RBP7.25□□□□□ -1.25
CD44-204ENST00000279452 PBX4Q9BYU1 374 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 INO80BQ9C086 356 aaPredicted RBP7.25□□□□□ -1.25
CD44-204ENST00000279452 ADAMTS10Q9H324 1103 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 ZHX3Q9H4I2 956 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms