RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 MTERF2Q49AM1 385 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 PLPP4Q5VZY2 271 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 BLIDQ8IZY5 108 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 LRRC43Q8N309 656 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 LINC01465Q8N7H1 131 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 MSLNLQ96KJ4 702 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 LARP6Q9BRS8 491 aaKnown RBP14.38□□□□□ -0.11
CD44-203ENST00000278386 TMEM117Q9H0C3 514 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 ELAC1Q9H777 363 aaKnown RBP14.38□□□□□ -0.11
CD44-203ENST00000278386 TLE6Q9H808 572 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 ENTPD7Q9NQZ7 604 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 PER2O15055 1255 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 GLP2RO95838 553 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 FGFR4P22455 802 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 EIF4BP23588 611 aaKnown RBP14.37□□□□□ -0.11
CD44-203ENST00000278386 GPC3P51654 580 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 Q4G0T1 1027 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 SMRP1Q8NCR6 262 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 RDM1Q8NG50 284 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 ADAMTS10Q9H324 1103 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 CWH43Q9H720 699 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 ZSWIM6Q9HCJ5 1215 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 MUTYHQ9UIF7 546 aa14.37□□□□□ -0.11
CD44-203ENST00000278386 ARIH1Q9Y4X5 557 aaPredicted RBP14.37□□□□□ -0.11
CD44-203ENST00000278386 FSD2A1L4K1 749 aa14.36□□□□□ -0.11
CD44-203ENST00000278386 TMEM150BA6NC51 233 aa14.36□□□□□ -0.11
CD44-203ENST00000278386 EPB41L2O43491 1005 aaKnown RBP14.36□□□□□ -0.11
CD44-203ENST00000278386 EDIL3O43854 480 aa14.36□□□□□ -0.11
CD44-203ENST00000278386 PSMD10O75832 226 aa14.36□□□□□ -0.11
CD44-203ENST00000278386 SRGAP2BP0DMP2 458 aa14.36□□□□□ -0.11
CD44-203ENST00000278386 DARSP14868 501 aaKnown RBP14.36□□□□□ -0.11
CD44-203ENST00000278386 NONOQ15233 471 aaKnown RBP eCLIP14.36□□□□□ -0.11
CD44-203ENST00000278386 ECHDC2Q86YB7 292 aa14.36□□□□□ -0.11
CD44-203ENST00000278386 ZNF710Q8N1W2 664 aa14.36□□□□□ -0.11
CD44-203ENST00000278386 DAGLBQ8NCG7 672 aa14.36□□□□□ -0.11
CD44-203ENST00000278386 ZNF274Q96GC6 653 aaPredicted RBP14.36□□□□□ -0.11
CD44-203ENST00000278386 AIFM3Q96NN9 605 aa14.36□□□□□ -0.11
CD44-203ENST00000278386 CLEC1BQ9P126 229 aa14.36□□□□□ -0.11
CD44-203ENST00000278386 DDX25Q9UHL0 483 aaKnown RBP14.36□□□□□ -0.11
CD44-203ENST00000278386 EYA4O95677 639 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 CA8P35219 290 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 PPM1AP35813 382 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 PBX3P40426 434 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 ERVFC1P60507 584 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 FAM189BP81408 668 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 COASYQ13057 564 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 DRP2Q13474 957 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 INF2Q27J81 1249 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 LETM2Q2VYF4 491 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 XKR3Q5GH77 459 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 PDE12Q6L8Q7 609 aaKnown RBP14.35□□□□□ -0.11
CD44-203ENST00000278386 KRT25Q7Z3Z0 450 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 HELQQ8TDG4 1101 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 MRPS27Q92552 414 aaKnown RBP14.35□□□□□ -0.11
CD44-203ENST00000278386 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 CASD1Q96PB1 797 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 CDCA3Q99618 268 aaPredicted RBP14.35□□□□□ -0.11
CD44-203ENST00000278386 TCF25Q9BQ70 676 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 SH2D3AQ9BRG2 576 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 GCOM2Q9BZD3 368 aaPredicted RBP14.35□□□□□ -0.11
CD44-203ENST00000278386 PDRG1Q9NUG6 133 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 RNF19AQ9NV58 838 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 DACT1Q9NYF0 836 aa14.35□□□□□ -0.11
CD44-203ENST00000278386 PUF60Q9UHX1 559 aaKnown RBP14.35□□□□□ -0.11
CD44-203ENST00000278386 USP15Q9Y4E8 981 aaPredicted RBP14.35□□□□□ -0.11
CD44-203ENST00000278386 CYP3A7-CYP3A51PA0A087WV96 503 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 CCDC194A0A1B0GVG4 234 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 FSCN2O14926 492 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 CSDE1O75534 798 aaKnown RBP14.34□□□□□ -0.11
CD44-203ENST00000278386 CDKL5O76039 1030 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 SFPQP23246 707 aaKnown RBP eCLIP14.34□□□□□ -0.11
CD44-203ENST00000278386 CYP3A7P24462 503 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 DNM2P50570 870 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 RBM10P98175 930 aaKnown RBP14.34□□□□□ -0.11
CD44-203ENST00000278386 DUSP6Q16828 381 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 CLLU1OSQ5K130 101 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 GALNT17Q6IS24 598 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 LLGL2Q6P1M3 1020 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 KCNT2Q6UVM3 1135 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 MOXD1Q6UVY6 613 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 RNF135Q8IUD6 432 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 ETNPPLQ8TBG4 499 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 TM6SF1Q9BZW5 370 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 KCNJ14Q9UNX9 436 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 LZTS1Q9Y250 596 aa14.34□□□□□ -0.11
CD44-203ENST00000278386 A0A087WZ62 844 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 DDX11L8A8MPP1 907 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 M0R2N6 131 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 SLC37A4O43826 429 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 XBP1P17861 261 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 PLCB3Q01970 1234 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 KRT17Q04695 432 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 TARBP2Q15633 366 aaKnown RBP14.33□□□□□ -0.12
CD44-203ENST00000278386 NPY5RQ15761 445 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 PLA2G4FQ68DD2 849 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 TWF2Q6IBS0 349 aaKnown RBP14.33□□□□□ -0.12
CD44-203ENST00000278386 LRRC55Q6ZSA7 311 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 TMC7Q7Z402 723 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 RHPN2Q8IUC4 686 aa14.33□□□□□ -0.12
CD44-203ENST00000278386 FAM177A1Q8N128 213 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms