RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 SOX5P35711 763 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 ATP6V1G3Q96LB4 118 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 PHKG2P15735 406 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 CC2D1AQ6P1N0 951 aaPredicted RBP8.51□□□□□ -1.05
LIMD1-201ENST00000273317 STX19Q8N4C7 294 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 PGBD1Q96JS3 809 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 KRT16P08779 473 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 NUGGCQ68CJ6 796 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 ATP11CQ8NB49 1132 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 CCDC22O60826 627 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 KRT7P08729 469 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 EFTUD2Q15029 972 aaKnown RBP eCLIP8.51□□□□□ -1.051e-6■■□□□ 11.7
LIMD1-201ENST00000273317 DCPSQ96C86 337 aaKnown RBP8.51□□□□□ -1.05
LIMD1-201ENST00000273317 CHCHD3Q9NX63 227 aaKnown RBP8.51□□□□□ -1.05
LIMD1-201ENST00000273317 KIAA1755Q5JYT7 1200 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 TOGARAM2Q6ZUX3 1019 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 MTA3Q9BTC8 594 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 NUP85Q9BW27 656 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 ECT2Q9H8V3 914 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 ABCA8O94911 1581 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 MICAL3Q7RTP6 2002 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 DHX34Q14147 1143 aaKnown RBP8.51□□□□□ -1.05
LIMD1-201ENST00000273317 KYAT1Q16773 422 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 SMYD4Q8IYR2 804 aaPredicted RBP8.51□□□□□ -1.05
LIMD1-201ENST00000273317 SNX19Q92543 992 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 DYDC2Q96IM9 177 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 COG4Q9H9E3 785 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 NR3C1P04150 777 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 GOLGA8FQ08AF8 430 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 GOLGA8DPQ0D2H9 430 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 AP1B1Q10567 949 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 APLFQ8IW19 511 aaPredicted RBP8.51□□□□□ -1.05
LIMD1-201ENST00000273317 EDEM3Q9BZQ6 932 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 DBNLQ9UJU6 430 aaKnown RBP8.51□□□□□ -1.05
LIMD1-201ENST00000273317 CACNA1FO60840 1977 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 GMNCA6NCL1 334 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 MYO1CO00159 1063 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 APOA1P02647 267 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 GOLGA8HP0CJ92 632 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 ADORA1P30542 326 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 ALKBH5Q6P6C2 394 aaKnown RBP8.51□□□□□ -1.05
LIMD1-201ENST00000273317 ERICH1Q86X53 443 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 NCAPG2Q86XI2 1143 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 FSD1LQ9BXM9 530 aa8.51□□□□□ -1.05
LIMD1-201ENST00000273317 TRIP13Q15645 432 aaPredicted RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 AP1M1Q9BXS5 423 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 OLA1Q9NTK5 396 aaKnown RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 GOLGA8TH3BQL2 631 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 NLRP14Q86W24 1093 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 CEP170P1Q96L14 293 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 GGCXP38435 758 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 TEX9Q8N6V9 391 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 GINM1Q9NU53 330 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 LRFN2Q9ULH4 789 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 INO80B-WBP1J3KQ70 363 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 LZICQ8WZA0 190 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 SH3GL3Q99963 347 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 INO80BQ9C086 356 aaPredicted RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 CDV3Q9UKY7 258 aaKnown RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 FOSL2P15408 326 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 INPP5AQ14642 412 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 MCPH1Q8NEM0 835 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 COPG1Q9Y678 874 aaKnown RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 MAP2P11137 1827 aaKnown RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 PHKA1P46020 1223 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 HSPA2P54652 639 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 MRPL28Q13084 256 aaKnown RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 LRIG3Q6UXM1 1119 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 CDKL3Q8IVW4 592 aaPredicted RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 NAF1Q96HR8 494 aaKnown RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 KAT6AQ92794 2004 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 MYO1DO94832 1006 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 ANGPTL8Q6UXH0 198 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 ENOSF1Q7L5Y1 443 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 FAM129AQ9BZQ8 928 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 UGGT1Q9NYU2 1555 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 WARS2Q9UGM6 360 aaKnown RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 IP6K2Q9UHH9 426 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 GOLGA8JA6NMD2 632 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 AP3B1O00203 1094 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 IL10P22301 178 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 GPC5P78333 572 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 CAPRIN2Q6IMN6 1127 aaKnown RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 TBC1D1Q86TI0 1168 aaPredicted RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 NUDCD3Q8IVD9 361 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 PPP1R2P1Q96PQ5 205 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 MPP6Q9NZW5 540 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 BMP3P12645 472 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 ZSCAN20P17040 1043 aaPredicted RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 CDH2P19022 906 aaPredicted RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 NAALADL2Q58DX5 795 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 BRIP1Q9BX63 1249 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 ADAM21Q9UKJ8 722 aa8.5□□□□□ -1.05
LIMD1-201ENST00000273317 ZCCHC11Q5TAX3 1644 aaKnown RBP8.5□□□□□ -1.05
LIMD1-201ENST00000273317 MED21Q13503 144 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ZWILCHQ9H900 591 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 SEL1LQ9UBV2 794 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 TRAF3IP3Q9Y228 551 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 RNF17Q9BXT8 1623 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms