RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 TARBP2Q15633 366 aaKnown RBP13.31□□□□□ -0.28
SDE2-201ENST00000272091 MEA1Q16626 185 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 MTERF2Q49AM1 385 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 TAPT1Q6NXT6 567 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 NIFKQ9BYG3 293 aaKnown RBP13.31□□□□□ -0.28
SDE2-201ENST00000272091 GBP3Q9H0R5 595 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 LOC102724159A0A0B4J2E5 919 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 FANCGO15287 622 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 DKC1O60832 514 aaKnown RBP eCLIP13.31□□□□□ -0.28
SDE2-201ENST00000272091 KCNH2Q12809 1159 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 PWP2Q15269 919 aaKnown RBP13.31□□□□□ -0.28
SDE2-201ENST00000272091 GPR142Q7Z601 462 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 TMEM174Q8WUU8 243 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 UBE2Q2Q8WVN8 375 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 BAP1Q92560 729 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 SLC35C1Q96A29 364 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 NUP58Q9BVL2 599 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 FAM207AQ9NSI2 230 aaPredicted RBP13.31□□□□□ -0.28
SDE2-201ENST00000272091 LUC7L2Q9Y383 392 aaKnown RBP13.31□□□□□ -0.28
SDE2-201ENST00000272091 PASKQ96RG2 1323 aa13.31□□□□□ -0.28
SDE2-201ENST00000272091 DGAT1O75907 488 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 CCNA1P78396 465 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 TAS1R3Q7RTX0 852 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 PARK7Q99497 189 aaKnown RBP13.3□□□□□ -0.28
SDE2-201ENST00000272091 R3HCC1Q9Y3T6 440 aaKnown RBP13.3□□□□□ -0.28
SDE2-201ENST00000272091 LGR5O75473 907 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 TRIM21P19474 475 aaKnown RBP13.3□□□□□ -0.28
SDE2-201ENST00000272091 GRB14Q14449 540 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 SLC9A9Q8IVB4 645 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 ABRAQ8N0Z2 381 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 OR8K1Q8NGG5 319 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 NTPCRQ9BSD7 190 aaKnown RBP13.3□□□□□ -0.28
SDE2-201ENST00000272091 DHX33Q9H6R0 707 aaKnown RBP13.3□□□□□ -0.28
SDE2-201ENST00000272091 ARMCX3Q9UH62 379 aaPredicted RBP13.3□□□□□ -0.28
SDE2-201ENST00000272091 ADGRG1Q9Y653 693 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 NRDCO43847 1150 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 TNNT1P13805 278 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 ZBED6P86452 979 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 ALCAMQ13740 583 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 EMC2Q15006 297 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 STXBP4Q6ZWJ1 553 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 TRIM50Q86XT4 487 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 ATP6V0A4Q9HBG4 840 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 FAM184BQ9ULE4 1060 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 ZBTB42B2RXF5 422 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 TPM1P09493 284 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 RPL13P26373 211 aaKnown RBP13.3□□□□□ -0.28
SDE2-201ENST00000272091 CYP2J2P51589 502 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 FAM110CQ1W6H9 321 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 SLC39A4Q6P5W5 647 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 TRIM65Q6PJ69 517 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 SAPCD2Q86UD0 394 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 SPIRE2Q8WWL2 714 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 SEPT1Q8WYJ6 367 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 KIFAP3Q92845 792 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 ACCSQ96QU6 501 aa13.3□□□□□ -0.28
SDE2-201ENST00000272091 POLR3FQ9H1D9 316 aaPredicted RBP13.3□□□□□ -0.28
SDE2-201ENST00000272091 ANKRD63C9JTQ0 380 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 SNAI1O95863 264 aaPredicted RBP13.29□□□□□ -0.28
SDE2-201ENST00000272091 DNTTIP2Q5QJE6 756 aaKnown RBP13.29□□□□□ -0.28
SDE2-201ENST00000272091 GJC2Q5T442 439 aaPredicted RBP13.29□□□□□ -0.28
SDE2-201ENST00000272091 CBWD1Q9BRT8 395 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 CRACR2AQ9BSW2 395 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
SDE2-201ENST00000272091 REXO2Q9Y3B8 237 aaKnown RBP13.29□□□□□ -0.28
SDE2-201ENST00000272091 ASB14A6NK59 587 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 ADSSP30520 456 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 RTP1P59025 263 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 KCNV1Q6PIU1 500 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 C12orf56Q8IXR9 622 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 FAM186BQ8IYM0 893 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 ACRBPQ8NEB7 543 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 ASAP3Q8TDY4 903 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 PCMTD1Q96MG8 357 aaPredicted RBP13.29□□□□□ -0.28
SDE2-201ENST00000272091 MPHOSPH6Q99547 160 aaKnown RBP13.29□□□□□ -0.28
SDE2-201ENST00000272091 GANQ9H2C0 597 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 MMRN2Q9H8L6 949 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 MLXIPQ9HAP2 919 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 TBX20Q9UMR3 447 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 EPB41P11171 864 aaKnown RBP13.29□□□□□ -0.28
SDE2-201ENST00000272091 STAT5BP51692 787 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 ARHGAP1Q07960 439 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 CYP26C1Q6V0L0 522 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 TMTC1Q8IUR5 882 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 MAP4K3Q8IVH8 894 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 MCPH1Q8NEM0 835 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
SDE2-201ENST00000272091 RBM47A0AV96 593 aaKnown RBP13.28□□□□□ -0.28
SDE2-201ENST00000272091 HNRNPH3P31942 346 aaKnown RBP13.28□□□□□ -0.28
SDE2-201ENST00000272091 PSMC2P35998 433 aaKnown RBP13.28□□□□□ -0.28
SDE2-201ENST00000272091 TMEM143Q96AN5 459 aa13.28□□□□□ -0.28
SDE2-201ENST00000272091 LSM14BQ9BX40 385 aaKnown RBP13.28□□□□□ -0.28
SDE2-201ENST00000272091 TMEM206Q9H813 350 aa13.28□□□□□ -0.28
SDE2-201ENST00000272091 SIX2Q9NPC8 291 aa13.28□□□□□ -0.28
SDE2-201ENST00000272091 CPA4Q9UI42 421 aa13.28□□□□□ -0.28
SDE2-201ENST00000272091 FAM155AB1AL88 458 aaPredicted RBP13.28□□□□□ -0.28
SDE2-201ENST00000272091 STRNO43815 780 aa13.28□□□□□ -0.28
SDE2-201ENST00000272091 AFPP02771 609 aaKnown RBP13.28□□□□□ -0.28
SDE2-201ENST00000272091 TXNP10599 105 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms