RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 MYL1P05976 194 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SCTRP47872 440 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 FXR2P51116 673 aaKnown RBP eCLIP17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MOB2Q70IA6 237 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 FAM114A1Q8IWE2 563 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 WHAMMQ8TF30 809 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 NSMCE1Q8WV22 266 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 P2RX7Q99572 595 aaKnown RBP17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 PCDHA12Q9UN75 941 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ARFGEF1Q9Y6D6 1849 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SBF1O95248 1867 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CDC25CP30307 473 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CACNB1Q02641 598 aaPredicted RBP17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 HLTFQ14527 1009 aaKnown RBP eCLIP17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 KLHL7Q8IXQ5 586 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ZBTB10Q96DT7 871 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 STAMBPL1Q96FJ0 436 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SEC16BQ96JE7 1060 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SEMA6BQ9H3T3 888 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 BAIAP2L1Q9UHR4 511 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 BICDL2A1A5D9 508 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 GCOM1H8Y6P7 765 aaPredicted RBP17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 RAD51CO43502 376 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 TRAPPC3O43617 180 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MYZAPP0CAP1 466 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 STAT3P40763 770 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MYO1EQ12965 1108 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ARFGAP2Q8N6H7 521 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 C1orf131Q8NDD1 294 aaKnown RBP17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ETAA1Q9NY74 926 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 TBC1D7Q9P0N9 293 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SIK3Q9Y2K2 1263 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 PJA2O43164 708 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 PALMO75781 387 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 POTEIP0CG38 1075 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 POTEJP0CG39 1038 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 HSPA9P38646 679 aaKnown RBP17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 EAPPQ56P03 285 aaPredicted RBP17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CCDC174Q6PII3 467 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CCDC155Q8N6L0 562 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 DDX12PQ92771 950 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 WRNIP1Q96S55 665 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SLC12A6Q9UHW9 1150 aa17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.35■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SRRM3A6NNA2 597 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MGRN1O60291 552 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 HSD17B3P37058 310 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ODF2Q5BJF6 829 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MICAL1Q8TDZ2 1067 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CNKSR2Q8WXI2 1034 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 RAD54LQ92698 747 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 RAB34Q9BZG1 259 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MAGEF1Q9HAY2 307 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MYH7BA7E2Y1 1941 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 E9PMD0 336 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 BUB1BO60566 1050 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 HOXA13P31271 388 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 BYSLQ13895 437 aaKnown RBP17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 PROCA1Q8NCQ7 364 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CCDC26Q8TAB7 109 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MKL1Q969V6 931 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 NDST4Q9H3R1 872 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 NOD2Q9HC29 1040 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 XRCC4Q13426 336 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 TNFAIP1Q13829 316 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 PDIA5Q14554 519 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 VWA3BQ502W6 1294 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 TDRD12Q587J7 1177 aaKnown RBP17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CDCA2Q69YH5 1023 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CNNM4Q6P4Q7 775 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SAAL1Q96ER3 474 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ANO3Q9BYT9 981 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 PLCB1Q9NQ66 1216 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 RNF14Q9UBS8 474 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CNOT8Q9UFF9 292 aaKnown RBP17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 TSKSQ9UJT2 592 aa17.34■□□□□ 0.37
MAP1LC3B-201ENST00000268607 NPHP3-ACAD11A0A0J9YXS1 232 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 ATP6V1G2O95670 118 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 BMP3P12645 472 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 IFFO1Q0D2I5 559 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 FKBP1CQ5VVH2 108 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 PPP1R18Q6NYC8 613 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 CACNA2D3Q8IZS8 1091 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 TBC1D5Q92609 795 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 HOOK2Q96ED9 719 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 KIAA1024Q9UPX6 916 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 MEIS2O14770 477 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 PEX10O60683 326 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 CLSTN1O94985 981 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 CTNNA1P35221 906 aaKnown RBP17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 EHHADHQ08426 723 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 SPP2Q13103 211 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 UAP1Q16222 522 aaPredicted RBP17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 ASTE1Q2TB18 679 aaPredicted RBP17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 PRR16Q569H4 304 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 SLC30A10Q6XR72 485 aa17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 BZW1Q7L1Q6 419 aaKnown RBP17.33■□□□□ 0.36
MAP1LC3B-201ENST00000268607 DDX42Q86XP3 938 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■■■■■ 29.9
MAP1LC3B-201ENST00000268607 SH3BP1Q9Y3L3 701 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms