RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PPME1Q9Y570 386 aa18■□□□□ 0.47
TPM1-201ENST00000267996 EMSYQ7Z589 1322 aa18■□□□□ 0.47
TPM1-201ENST00000267996 SLC16A3O15427 465 aaKnown RBP17.99■□□□□ 0.47
TPM1-201ENST00000267996 MFAP3LO75121 409 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 ADKP55263 362 aaKnown RBP17.99■□□□□ 0.47
TPM1-201ENST00000267996 ARHGAP1Q07960 439 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 MYBPC2Q14324 1141 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 NOLC1Q14978 699 aaKnown RBP eCLIP17.99■□□□□ 0.47
TPM1-201ENST00000267996 MTERF2Q49AM1 385 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 FKBP15Q5T1M5 1219 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 TMEM63BQ5T3F8 832 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 HS2ST1Q7LGA3 356 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 HAUS6Q7Z4H7 955 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 SLC9A9Q8IVB4 645 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 KSR1Q8IVT5 923 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 KCNN1Q92952 543 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 HVCN1Q96D96 273 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 CCDC51Q96ER9 411 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 FAM167AQ96KS9 214 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 SPATA33Q96N06 139 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 TMEM206Q9H813 350 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 AGPAT3Q9NRZ7 376 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 KCND1Q9NSA2 647 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 RASSF10A6NK89 507 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 PES1O00541 588 aaKnown RBP17.99■□□□□ 0.47
TPM1-201ENST00000267996 NOP56O00567 594 aaKnown RBP17.99■□□□□ 0.47
TPM1-201ENST00000267996 NRDCO43847 1150 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 FECHP22830 423 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 RFC5P40937 340 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 NPTX2P47972 431 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 TM4SF4P48230 202 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 FXR1P51114 621 aaKnown RBP eCLIP17.99■□□□□ 0.47
TPM1-201ENST00000267996 SREBF2Q12772 1141 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 LAMC2Q13753 1193 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 SYCP1Q15431 976 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 CNGA4Q8IV77 575 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 C12orf56Q8IXR9 622 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 C17orf53Q8N3J3 647 aaPredicted RBP17.99■□□□□ 0.47
TPM1-201ENST00000267996 RETREG2Q8NC44 543 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 TMEM161BQ8NDZ6 487 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 NPLOC4Q8TAT6 608 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 BSNDQ8WZ55 320 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 EMID1Q96A84 441 aaPredicted RBP17.99■□□□□ 0.47
TPM1-201ENST00000267996 ACCSQ96QU6 501 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 TINF2Q9BSI4 451 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 TTYH3Q9C0H2 523 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 IKZF4Q9H2S9 585 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 AZI2Q9H6S1 392 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 CGNQ9P2M7 1197 aaKnown RBP17.99■□□□□ 0.47
TPM1-201ENST00000267996 FAM184BQ9ULE4 1060 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 SIK3Q9Y2K2 1263 aa17.99■□□□□ 0.47
TPM1-201ENST00000267996 CLIC2O15247 247 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 AKAP3O75969 853 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 HOXC6P09630 235 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 CASP14P31944 242 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 SNRPFP62306 86 aaKnown RBP17.98■□□□□ 0.47
TPM1-201ENST00000267996 DMP1Q13316 513 aaPredicted RBP17.98■□□□□ 0.47
TPM1-201ENST00000267996 EMC2Q15006 297 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 FIGNQ5HY92 759 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 USP6NLQ92738 828 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 BORCS6Q96GS4 357 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 MKNK1Q9BUB5 465 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 NUP58Q9BVL2 599 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 METTL14Q9HCE5 456 aaKnown RBP17.98■□□□□ 0.47
TPM1-201ENST00000267996 SLC5A4Q9NY91 659 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 DOCK3Q8IZD9 2030 aa17.98■□□□□ 0.47
TPM1-201ENST00000267996 TMEM88BA6NKF7 163 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 RNF225M0QZC1 329 aaPredicted RBP17.97■□□□□ 0.47
TPM1-201ENST00000267996 SLC16A4O15374 487 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 STX10O60499 249 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 GH1P01241 217 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 TPM1P09493 284 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 SLC26A2P50443 739 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 SMTNP53814 917 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 POLGP54098 1239 aaPredicted RBP17.97■□□□□ 0.47
TPM1-201ENST00000267996 SOX10P56693 466 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 PPP2R3AQ06190 1150 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 MAP2K5Q13163 448 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 IRF5Q13568 498 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 ATP8B4Q8TF62 1192 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 BBXQ8WY36 941 aaPredicted RBP17.97■□□□□ 0.47
TPM1-201ENST00000267996 IQCDQ96DY2 449 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 ABHD16BQ9H3Z7 469 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 ZFYVE28Q9HCC9 887 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 ARMCX3Q9UH62 379 aaPredicted RBP17.97■□□□□ 0.47
TPM1-201ENST00000267996 KCNG1Q9UIX4 513 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 CAPN11Q9UMQ6 739 aa17.97■□□□□ 0.47
TPM1-201ENST00000267996 EPB41P11171 864 aaKnown RBP17.96■□□□□ 0.47
TPM1-201ENST00000267996 ARL2P36404 184 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 CASP4P49662 377 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 SYCP3Q8IZU3 236 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 CPLX3Q8WVH0 158 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 BAG1Q99933 345 aaPredicted RBP17.96■□□□□ 0.47
TPM1-201ENST00000267996 POLR3FQ9H1D9 316 aaPredicted RBP17.96■□□□□ 0.47
TPM1-201ENST00000267996 SMARCAD1Q9H4L7 1026 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 ABT1Q9ULW3 272 aaKnown RBP17.96■□□□□ 0.47
TPM1-201ENST00000267996 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.96■□□□□ 0.47
TPM1-201ENST00000267996 TTC26A0AVF1 554 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 CCDC169A6NNP5 214 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 MAFO75444 373 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms