RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 DNAJC13O75165 2243 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 EFCAB6Q5THR3 1501 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 PDE8BO95263 885 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 CCDC166P0CW27 439 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 RCAN1P53805 252 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 C1orf146Q5VVC0 180 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 SRRM1Q8IYB3 904 aaKnown RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 TGFBRAP1Q8WUH2 860 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 LENG1Q96BZ8 264 aaPredicted RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 PCDHA4Q9UN74 947 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 ATP10AO60312 1499 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 E9PMD0 336 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 ACTN1P12814 892 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 NR2F2P24468 414 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 HDAC4P56524 1084 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 RESP18Q5W5W9 173 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 CROCCP3Q8IVE0 287 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 RWDD3Q9Y3V2 267 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 RSPH10B2B2RC85 870 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 SH2B2O14492 632 aaPredicted RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 TTI1O43156 1089 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 RSPH10BP0C881 870 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 PTK2Q05397 1052 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 CDC37Q16543 378 aaPredicted RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 KDM7AQ6ZMT4 941 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 ZFP69BQ9UJL9 534 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 MAGI3Q5TCQ9 1506 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 DEAF1O75398 565 aaPredicted RBP6.09□□□□□ -1.44
VCAN-201ENST00000265077 STX1BP61266 288 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 RESTQ13127 1097 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 RASGRF1Q13972 1273 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 KRT31Q15323 416 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 CEP55Q53EZ4 464 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 OSBPL10Q9BXB5 764 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 PACSIN2Q9UNF0 486 aaPredicted RBP6.09□□□□□ -1.44
VCAN-201ENST00000265077 TRIM64CA6NLI5 447 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 PODXLO00592 558 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 CYP2E1P05181 493 aaPredicted RBP6.09□□□□□ -1.44
VCAN-201ENST00000265077 UBTFL6P0CB48 400 aaPredicted RBP6.09□□□□□ -1.44
VCAN-201ENST00000265077 STX3Q13277 289 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 ITIH4Q14624 930 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 USH1GQ495M9 461 aa6.09□□□□□ -1.44
VCAN-201ENST00000265077 SRPRBQ9Y5M8 271 aaKnown RBP6.09□□□□□ -1.44
VCAN-201ENST00000265077 GRID2IPA4D2P6 1211 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 FOXP2O15409 715 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 SASH3O75995 380 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 IFNAR1P17181 557 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 BSPRYQ5W0U4 402 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 ARMCX5Q6P1M9 558 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 FUKQ8N0W3 1084 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 RPAP3Q9H6T3 665 aaPredicted RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 ARL2BPQ9Y2Y0 163 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 POLR2MP0CAP2 368 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 MKRN3Q13064 507 aaKnown RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 ALCAMQ13740 583 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 CAPN12Q6ZSI9 719 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 CRLF3Q8IUI8 442 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 GALNT15Q8N3T1 639 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 NBPF15Q8N660 670 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 PTPN22Q9Y2R2 807 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 CAB39Q9Y376 341 aaPredicted RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 GOLGA8TH3BQL2 631 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 TNNC2P02585 160 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 GOLGA8HP0CJ92 632 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 EIF4A3P38919 411 aaKnown RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 TLK2Q86UE8 772 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 TMEM206Q9H813 350 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 MRPL40Q9NQ50 206 aaKnown RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 TMED5Q9Y3A6 229 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 COMMD3-BMI1R4GMX3 469 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 MAPK4P31152 587 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 SERPINB10P48595 397 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 STAG2Q8N3U4 1231 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 CATSPER1Q8NEC5 780 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 ZMYND8Q9ULU4 1186 aaPredicted RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 KIAA1024Q9UPX6 916 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 SGK1O00141 431 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 LDHAP00338 332 aaKnown RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 DSG1Q02413 1049 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 GRIN1Q05586 938 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 TUBA3EQ6PEY2 450 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 GLI2P10070 1586 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 ADCK5Q3MIX3 580 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 NXNQ6DKJ4 435 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 RHOT2Q8IXI1 618 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 STKLD1Q8NE28 680 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 ZNF219Q9P2Y4 722 aaPredicted RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 CAMSAP1Q5T5Y3 1602 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 PCCAP05165 728 aaPredicted RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 CXCR5P32302 372 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 LIG4P49917 911 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 ORC2Q13416 577 aaPredicted RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 MESDQ14696 234 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 KAZNQ674X7 775 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 KIF2BQ8N4N8 673 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 JDP2Q8WYK2 163 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 POMGNT1Q8WZA1 660 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 LGR6Q9HBX8 967 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 CLTCL1P53675 1640 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 CYP21A2P08686 494 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms