RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ARHGEF35A5YM69 484 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 SPTLC2O15270 562 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 MAGEB2O15479 319 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 DKC1O60832 514 aaKnown RBP eCLIP8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 UPP2O95045 317 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 PLCG1P19174 1290 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 TMOD1P28289 359 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 PBX2P40425 430 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 NASPP49321 788 aaPredicted RBP8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 GPC3P51654 580 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 FAM102BQ5T8I3 360 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 PADI6Q6TGC4 694 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 OTUD6AQ7L8S5 288 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 PRPF31Q8WWY3 499 aaKnown RBP8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 FAM161BQ96MY7 647 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 ZNF396Q96N95 335 aaPredicted RBP8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 MTRQ99707 1265 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 KIFC3Q9BVG8 833 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 RUSC1Q9BVN2 902 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 POLR3FQ9H1D9 316 aaPredicted RBP8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 DHX33Q9H6R0 707 aaKnown RBP8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 ATP6V0A4Q9HBG4 840 aa8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 NOC2LQ9Y3T9 749 aaKnown RBP8.07□□□□□ -1.12
DEPDC1B-201ENST00000265036 BRWD1Q9NSI6 2320 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 NPHP3-ACAD11A0A0J9YXS1 232 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 GPR32O75388 356 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 RPS6KA5O75582 802 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 BMP15O95972 392 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 MYOGP15173 224 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 LIG1P18858 919 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 ME1P48163 572 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 PAK2Q13177 524 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 PDIA5Q14554 519 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 SLC39A14Q15043 492 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 RPUSD2Q8IZ73 545 aaKnown RBP8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 KRI1Q8N9T8 703 aaKnown RBP8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 RNF149Q8NC42 400 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 ASAP3Q8TDY4 903 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 NACC1Q96RE7 527 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 PADI3Q9ULW8 664 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 COL4A3BPQ9Y5P4 624 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 A0A087X0B3 334 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 IGKV6-21A0A0C4DH24 114 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 LYPLA2O95372 231 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 CXCL10P02778 98 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 BMP8BP34820 402 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 KCNJ6P48051 423 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 DNM2P50570 870 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 TTC3P53804 2025 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 WDR5P61964 334 aaKnown RBP8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 LAMTOR4Q0VGL1 99 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 LONRF3Q496Y0 759 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 PLEKHG4Q58EX7 1191 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 CNKSR3Q6P9H4 555 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 TSHZ1Q6ZSZ6 1077 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 SPRED2Q7Z698 418 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 FAM228AQ86W67 206 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 PSPC1Q8WXF1 523 aaKnown RBP8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 LINC01599Q8WXQ3 324 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 BSNDQ8WZ55 320 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 MINDY3Q9H8M7 445 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 USP20Q9Y2K6 914 aa8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 RBM19Q9Y4C8 960 aaKnown RBP8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 SRPRBQ9Y5M8 271 aaKnown RBP8.06□□□□□ -1.12
DEPDC1B-201ENST00000265036 LRRIQ4A6NIV6 560 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 SFI1A8K8P3 1242 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 MGEA5O60502 916 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 DGAT1O75907 488 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 ATP2A2P16615 1042 aaKnown RBP8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 LONP1P36776 959 aaKnown RBP8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 RFC5P40937 340 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 CAPSQ13938 189 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 Q7L0L9 218 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 CDR2LQ86X02 465 aaPredicted RBP8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 SEPT8Q92599 483 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 STAMQ92783 540 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 CALML4Q96GE6 196 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 ADAMTS10Q9H324 1103 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 ANKEF1Q9NU02 776 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 ST3GAL5Q9UNP4 418 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 DNM3Q9UQ16 869 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 SLC4A7Q9Y6M7 1214 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 C5orf42Q9H799 3197 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 KDM3AQ9Y4C1 1321 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 PRRC2BQ5JSZ5 2229 aaKnown RBP8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 CAND2O75155 1236 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 ACTN1P12814 892 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 GLRA2P23416 452 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 RFC2P35250 354 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 DDIT3P35638 169 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 MCM6Q14566 821 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 FAM26DQ5JW98 314 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 RPAINQ86UA6 219 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 RNF169Q8NCN4 708 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 HERVK_113Q902F9 699 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 SPATA32Q96LK8 384 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 AK8Q96MA6 479 aa8.05□□□□□ -1.12
DEPDC1B-201ENST00000265036 PCDHA7Q9UN72 937 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms