RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ANXA13P27216 316 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 OTOP1Q7RTM1 612 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 PBKQ96KB5 322 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 PLCB1Q9NQ66 1216 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 OLFML3Q9NRN5 406 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 CTTNBP2NLQ9P2B4 639 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 THSD7AQ9UPZ6 1657 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 TMEM110-MUSTN1A8MSY1 372 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 ICAM1P05362 532 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 MAGEA9P43362 315 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 ZC2HC1CQ53FD0 456 aaPredicted RBP17.67■□□□□ 0.42
CTCF-201ENST00000264010 MKNK1Q9BUB5 465 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 SPATA31C1P0DKV0 1188 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 EPHB4P54760 987 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 MAP2K1Q02750 393 aaPredicted RBP17.67■□□□□ 0.42
CTCF-201ENST00000264010 DMP1Q13316 513 aaPredicted RBP17.67■□□□□ 0.42
CTCF-201ENST00000264010 PTPROQ16827 1216 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 GNPTABQ3T906 1256 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 GLE1Q53GS7 698 aaKnown RBP17.67■□□□□ 0.42
CTCF-201ENST00000264010 WDR93Q6P2C0 686 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 INTS8Q75QN2 995 aaKnown RBP17.67■□□□□ 0.42
CTCF-201ENST00000264010 EXOC4Q96A65 974 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 KRT12Q99456 494 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 PPP1R12CQ9BZL4 782 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 UNC45AQ9H3U1 944 aa17.67■□□□□ 0.42
CTCF-201ENST00000264010 ARP10275 920 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 PRLRP16471 622 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 JAK3P52333 1124 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 ARSHQ5FYA8 562 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 MMS22LQ6ZRQ5 1243 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 KIFAP3Q92845 792 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 RANBP17Q9H2T7 1088 aaKnown RBP17.66■□□□□ 0.42
CTCF-201ENST00000264010 FAM204AQ9H8W3 233 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 MYOZ2Q9NPC6 264 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 STIM2Q9P246 746 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 GOLGA6CA6NDK9 693 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 GOLGA6DP0CG33 693 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 FDX1P10109 184 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 GUCY2DQ02846 1103 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 NAB2Q15742 525 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 BAP1Q92560 729 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 SLC5A5Q92911 643 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 ATP6V0A1Q93050 837 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 GOLGA6AQ9NYA3 693 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 RCCD1A6NED2 376 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 YDJCA8MPS7 323 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 WDR64B1ANS9 1081 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 AKAP3O75969 853 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 ATP1A2P50993 1020 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 AMPD2Q01433 879 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 KCNMA1Q12791 1236 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 KCTD10Q9H3F6 313 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 ATRNL1Q5VV63 1379 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 SLITRK3O94933 977 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 CCND2P30279 289 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 SLC7A5Q01650 507 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 PPP2R5CQ13362 524 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 ZCWPW2Q504Y3 356 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 SRLQ86TD4 932 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 PLVAPQ9BX97 442 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 KCNG1Q9UIX4 513 aa17.66■□□□□ 0.42
CTCF-201ENST00000264010 FANCGO15287 622 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 HEXIM1O94992 359 aaKnown RBP17.65■□□□□ 0.42
CTCF-201ENST00000264010 KRT76Q01546 638 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 A0A087X0T9 212 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 KRIT1O00522 736 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 LRRN2O75325 713 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 FAM228BP0C875 321 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 TRIM49P0CI25 452 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 TRIM49CP0CI26 452 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 PON1P27169 355 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 CASP5P51878 434 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 SPP2Q13103 211 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 PPFIA1Q13136 1202 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 SIAH1Q8IUQ4 282 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 CCDC127Q96BQ5 260 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 INTS2Q9H0H0 1204 aaKnown RBP17.65■□□□□ 0.42
CTCF-201ENST00000264010 VPS33BQ9H267 617 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 RASAL2Q9UJF2 1139 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 L1RE1Q9UN81 338 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 CASP4P49662 377 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 PEX3P56589 373 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 CXCL9Q07325 125 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 ACTN3Q08043 901 aaPredicted RBP17.65■□□□□ 0.42
CTCF-201ENST00000264010 IFFO1Q0D2I5 559 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 DRAP1Q14919 205 aaPredicted RBP17.65■□□□□ 0.42
CTCF-201ENST00000264010 UBL4BQ8N7F7 174 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 XXYLT1Q8NBI6 393 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 SLC16A10Q8TF71 515 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 FNBP1Q96RU3 617 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 FGFBP2Q9BYJ0 223 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 KCNH7Q9NS40 1196 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 AIPL1Q9NZN9 384 aa17.65■□□□□ 0.42
CTCF-201ENST00000264010 KLRC1P26715 233 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 FMO5P49326 533 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 PTK2Q05397 1052 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 TBC1D10BQ4KMP7 808 aaPredicted RBP17.64■□□□□ 0.41
CTCF-201ENST00000264010 SLC30A10Q6XR72 485 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 MMGT1Q8N4V1 131 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 COG1Q8WTW3 980 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms