RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CYP26B1Q9NR63 512 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 ZNHIT6Q9NWK9 470 aaKnown RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 GSTTP1A0A1W2PQM5 241 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 NOL4O94818 638 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 AFPP02771 609 aaKnown RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 CYP2J2P51589 502 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 PPP2R3AQ06190 1150 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 DCAF17Q5H9S7 520 aaPredicted RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 FAM186BQ8IYM0 893 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 GPRC5AQ8NFJ5 357 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 GOLGA5Q8TBA6 731 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 ACCSQ96QU6 501 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 LSM14BQ9BX40 385 aaKnown RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 NDUFA10O95299 355 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 TCERG1LQ5VWI1 586 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 ANKRD13CQ8N6S4 541 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 GTF3C2Q8WUA4 911 aaPredicted RBP17.33■□□□□ 0.36
VPS26A-201ENST00000263559 BAP1Q92560 729 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 SLC35C1Q96A29 364 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 PLAGL2Q9UPG8 496 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 SLC45A1Q9Y2W3 748 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 IGKV6D-21A0A0A0MT36 114 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 DGAT1O75907 488 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 ARIH2O95376 493 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 GGPS1O95749 300 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 NPTX2P47972 431 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 APBA1Q02410 837 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 RRAGAQ7L523 313 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 MKNK1Q9BUB5 465 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 LZTFL1Q9NQ48 299 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 XPNPEP1Q9NQW7 623 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 DNAI1Q9UI46 699 aa17.33■□□□□ 0.36
VPS26A-201ENST00000263559 DDX41Q9UJV9 622 aaKnown RBP17.33■□□□□ 0.36
VPS26A-201ENST00000263559 CCDC169A6NNP5 214 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 TISP43B9A030 160 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 HNRNPH3P31942 346 aaKnown RBP17.32■□□□□ 0.36
VPS26A-201ENST00000263559 MTERF2Q49AM1 385 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 SLC9A9Q8IVB4 645 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 BSNDQ8WZ55 320 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 KIFAP3Q92845 792 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 PCYT2Q99447 389 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 EDEM3Q9BZQ6 932 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 LRRC53A6NM62 1247 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 SMTNP53814 917 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 CACNA2D4Q7Z3S7 1137 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 NHEJ1Q9H9Q4 299 aaPredicted RBP17.32■□□□□ 0.36
VPS26A-201ENST00000263559 NLRC4Q9NPP4 1024 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 FRMD4BQ9Y2L6 1034 aa17.32■□□□□ 0.36
VPS26A-201ENST00000263559 FANCGO15287 622 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 OATP04181 439 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 CDK17Q00537 523 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 DMP1Q13316 513 aaPredicted RBP17.31■□□□□ 0.36
VPS26A-201ENST00000263559 SPRYD7Q5W111 196 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 METTL7BQ6UX53 244 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 ANKRD23Q86SG2 305 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 SLC17A8Q8NDX2 589 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 TMEM161BQ8NDZ6 487 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 KIFC3Q9BVG8 833 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 MLXIPQ9HAP2 919 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 ATP6V0A4Q9HBG4 840 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 CEP72Q9P209 647 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 REXO2Q9Y3B8 237 aaKnown RBP17.31■□□□□ 0.36
VPS26A-201ENST00000263559 FBXO16Q8IX29 292 aaPredicted RBP17.31■□□□□ 0.36
VPS26A-201ENST00000263559 MCPH1Q8NEM0 835 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 NTPCRQ9BSD7 190 aaKnown RBP17.31■□□□□ 0.36
VPS26A-201ENST00000263559 PCIF1Q9H4Z3 704 aa17.31■□□□□ 0.36
VPS26A-201ENST00000263559 EXOC3O60645 756 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 SLC9A1P19634 815 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 POLR2FP61218 127 aaKnown RBP17.3■□□□□ 0.36
VPS26A-201ENST00000263559 CCNA1P78396 465 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 MYBPC2Q14324 1141 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 PDXDC1Q6P996 788 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 RDH13Q8NBN7 331 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 MORC4Q8TE76 937 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 SEPT1Q8WYJ6 367 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 IRX2Q9BZI1 471 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-201ENST00000263559 C17orf75Q9HAS0 396 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 KMT5AQ9NQR1 393 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 PLXNA1Q9UIW2 1896 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 PLXNB2O15031 1838 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 PLEKP08567 350 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-201ENST00000263559 TCF7P36402 384 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-201ENST00000263559 GNG11P61952 73 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 CST9Q5W186 159 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 DPY19L2P1Q6NXN4 242 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 KCNV1Q6PIU1 500 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 SPIRE2Q8WWL2 714 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 CBWD1Q9BRT8 395 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 NMRK2Q9NPI5 230 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 TBX20Q9UMR3 447 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 PHLPP2Q6ZVD8 1323 aa17.3■□□□□ 0.36
VPS26A-201ENST00000263559 ABL1P00519 1130 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 ACTN1P12814 892 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 GPIHBP1Q8IV16 184 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 CCDC170Q8IYT3 715 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 WDR24Q96S15 920 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 PTPN18Q99952 460 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 GANQ9H2C0 597 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 ARHGAP20Q9P2F6 1191 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 CGNQ9P2M7 1197 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms