RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 MMP10P09238 476 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 LSP1P33241 339 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 FMO5P49326 533 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 ZYXQ15942 572 aaKnown RBP17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 KDM7AQ6ZMT4 941 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 PRMT6Q96LA8 375 aaPredicted RBP17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 CSRNP1Q96S65 589 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 FIZ1Q96SL8 496 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 PARVGQ9HBI0 331 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 KIF13BQ9NQT8 1826 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 SOX5P35711 763 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 PRPF4BQ13523 1007 aaKnown RBP17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 STRIP1Q5VSL9 837 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 SLC30A5Q8TAD4 765 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 GPR88Q9GZN0 384 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 DPH5Q9H2P9 285 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 FBXL5Q9UKA1 691 aa17.8■□□□□ 0.44
TM9SF1-201ENST00000261789 PSMD10O75832 226 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 CYP3A4P08684 503 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 FERP16591 822 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 CD302Q8IX05 232 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 PPM1EQ8WY54 764 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 ARHGEF26Q96DR7 871 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 LRRC4CQ9HCJ2 640 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.79■□□□□ 0.444e-6■■■■■ 72.1
TM9SF1-201ENST00000261789 BCCIPQ9P287 314 aaKnown RBP eCLIP17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 TISP43B9A030 160 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 DDX39AO00148 427 aaKnown RBP17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 FGGP02679 453 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 ARP10275 920 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 CTNNA1P35221 906 aaKnown RBP17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 STAT2P52630 851 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 ITGB3BPQ13352 177 aaPredicted RBP17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 TTC31Q49AM3 519 aaPredicted RBP17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 ODR4Q5SWX8 454 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 DCAF12L1Q5VU92 463 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 ZNF772Q68DY9 489 aaPredicted RBP17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 ZNF720Q7Z2F6 126 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 TADA2BQ86TJ2 420 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 FAM178BQ8IXR5 827 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 EFCAB13Q8IY85 973 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 UBLCP1Q8WVY7 318 aaPredicted RBP17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 MASTLQ96GX5 879 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 FAM107BQ9H098 131 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 PKD2L1Q9P0L9 805 aa17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 SUCLA2Q9P2R7 463 aaPredicted RBP17.79■□□□□ 0.44
TM9SF1-201ENST00000261789 H0YGN5 161 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 GAS7O60861 476 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 GAP43P17677 238 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 AOC3Q16853 763 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 HES6Q96HZ4 224 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 TRIM51Q9BSJ1 452 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 AGPAT3Q9NRZ7 376 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 CHORDC1Q9UHD1 332 aaPredicted RBP17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 NFS1Q9Y697 457 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 GTPBP10A4D1E9 387 aaKnown RBP17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 ZNF211Q13398 564 aaPredicted RBP17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 BTNL9Q6UXG8 535 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 TRMT1LQ7Z2T5 733 aaKnown RBP17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 LMBR1Q8WVP7 490 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 HOOK2Q96ED9 719 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 SH2D3AQ9BRG2 576 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 THAP2Q9H0W7 228 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 TMBIM4Q9HC24 238 aa17.78■□□□□ 0.44
TM9SF1-201ENST00000261789 TCP10L2B9ZVM9 353 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 PIK3CDO00329 1044 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 EIF3DO15371 548 aaKnown RBP eCLIP17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 DLG4P78352 724 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 CUL1Q13616 776 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 MCTP2Q6DN12 878 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 PHLDB3Q6NSJ2 640 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 AADACL2Q6P093 401 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 NLGN1Q8N2Q7 840 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 RASGEF1CQ8N431 466 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 CALR3Q96L12 384 aaKnown RBP17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 STK33Q9BYT3 514 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 UNC45AQ9H3U1 944 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 PCIF1Q9H4Z3 704 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 AMFRQ9UKV5 643 aa17.77■□□□□ 0.44
TM9SF1-201ENST00000261789 PPP1R12BO60237 982 aaPredicted RBP17.77■□□□□ 0.43
TM9SF1-201ENST00000261789 PDE6BP35913 854 aa17.77■□□□□ 0.43
TM9SF1-201ENST00000261789 ZNF844Q08AG5 666 aa17.77■□□□□ 0.43
TM9SF1-201ENST00000261789 INTS2Q9H0H0 1204 aaKnown RBP17.77■□□□□ 0.43
TM9SF1-201ENST00000261789 TUFT1Q9NNX1 390 aa17.77■□□□□ 0.43
TM9SF1-201ENST00000261789 FRMD4BQ9Y2L6 1034 aa17.77■□□□□ 0.43
TM9SF1-201ENST00000261789 COL11A2P13942 1736 aaPredicted RBP17.77■□□□□ 0.43
TM9SF1-201ENST00000261789 A0A087WUV0 522 aaPredicted RBP17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 A0A0A6YYK5 440 aaPredicted RBP17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 DCDC2CA8MYV0 355 aa17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 FOXN3O00409 490 aaPredicted RBP17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 PRELPP51888 382 aa17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 HS2ST1Q7LGA3 356 aa17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 EPN3Q9H201 632 aa17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 PPANQ9NQ55 473 aaKnown RBP17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 COG5Q9UP83 839 aa17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 STK24Q9Y6E0 443 aa17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 CLRN2A0PK11 232 aa17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 GOLGA6L10A6NI86 522 aa17.76■□□□□ 0.43
TM9SF1-201ENST00000261789 HMGB1P1B2RPK0 211 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms