RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ANKRD7Q92527 254 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 TAF4BQ92750 862 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 MKL1Q969V6 931 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 ACSF2Q96CM8 615 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 NACC1Q96RE7 527 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 GMLQ99445 158 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 APOL6Q9BWW8 343 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 LARSQ9P2J5 1176 aaKnown RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 FEM1BQ9UK73 627 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 PHLPP2Q6ZVD8 1323 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 PITPNM2Q9BZ72 1349 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 GOLGA6L9A6NEM1 432 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 VWA5AO00534 786 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 KIF20AO95235 890 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 GUCY2DQ02846 1103 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 SMAD1Q15797 465 aaKnown RBP9.91□□□□□ -0.82
CKAP2-201ENST00000258607 HSP90B2PQ58FF3 399 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 SYCP2LQ5T4T6 812 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 CAPN12Q6ZSI9 719 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 ALS2CR12Q96Q35 445 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 DDX47Q9H0S4 455 aaKnown RBP9.91□□□□□ -0.82
CKAP2-201ENST00000258607 A1CFQ9NQ94 594 aaKnown RBP9.91□□□□□ -0.82
CKAP2-201ENST00000258607 KMT5AQ9NQR1 393 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 CTTNBP2NLQ9P2B4 639 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 COL4A5P29400 1685 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 MYH4Q9Y623 1939 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 TAF1LQ8IZX4 1826 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 ANKRD63C9JTQ0 380 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 PTPRAP18433 802 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 RPL13P26373 211 aaKnown RBP9.91□□□□□ -0.82
CKAP2-201ENST00000258607 PAFAH1B1P43034 410 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 QARSP47897 775 aaKnown RBP9.91□□□□□ -0.82
CKAP2-201ENST00000258607 ATP1A2P50993 1020 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 BACE1P56817 501 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 MYL7Q01449 175 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 LRRC63Q05C16 580 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 GBP6Q6ZN66 633 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 ZNF571Q7Z3V5 609 aaPredicted RBP9.91□□□□□ -0.82
CKAP2-201ENST00000258607 FBXO16Q8IX29 292 aaPredicted RBP9.91□□□□□ -0.82
CKAP2-201ENST00000258607 GMCL1P1Q8NEA9 526 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 PDCD2LQ9BRP1 358 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 EHMT1Q9H9B1 1298 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 TRPC6Q9Y210 931 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 ASTN1O14525 1302 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 ZNF536O15090 1300 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 CYP3A7-CYP3A51PA0A087WV96 503 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 CYP26A1O43174 497 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 TGFB1I1O43294 461 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 EYA4O95677 639 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 FGFR4P22455 802 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 SNX1Q13596 522 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 SMC1AQ14683 1233 aaKnown RBP9.91□□□□□ -0.82
CKAP2-201ENST00000258607 IQCEQ6IPM2 695 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 CCDC60Q8IWA6 550 aaPredicted RBP9.91□□□□□ -0.82
CKAP2-201ENST00000258607 RBM46Q8TBY0 533 aaKnown RBP9.91□□□□□ -0.82
CKAP2-201ENST00000258607 FAM20AQ96MK3 541 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 LRRC27Q9C0I9 530 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 MTFR1LQ9H019 292 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 CCDC113Q9H0I3 377 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 SIK3Q9Y2K2 1263 aa9.91□□□□□ -0.82
CKAP2-201ENST00000258607 EFCAB8A8MWE9 144 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 INO80B-WBP1J3KQ70 363 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 FOXN3O00409 490 aaPredicted RBP9.9□□□□□ -0.82
CKAP2-201ENST00000258607 PSMD10O75832 226 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 ICAM1P05362 532 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 TNFAIP3P21580 790 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 PON1P27169 355 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 PGM5Q15124 567 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 HP1BP3Q5SSJ5 553 aaPredicted RBP9.9□□□□□ -0.82
CKAP2-201ENST00000258607 ZBTB41Q5SVQ8 909 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 C9orf131Q5VYM1 1079 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 PDXDC1Q6P996 788 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 B4GALNT4Q76KP1 1039 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 MAP7D2Q96T17 732 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 CELF4Q9BZC1 486 aaKnown RBP9.9□□□□□ -0.82
CKAP2-201ENST00000258607 INO80BQ9C086 356 aaPredicted RBP9.9□□□□□ -0.82
CKAP2-201ENST00000258607 AGPAT3Q9NRZ7 376 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 TLDC2A0PJX2 215 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 HPDP32754 393 aaPredicted RBP9.9□□□□□ -0.82
CKAP2-201ENST00000258607 STAT1P42224 750 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 PSMC4P43686 418 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 VAV2P52735 878 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 LENG1Q96BZ8 264 aaPredicted RBP9.9□□□□□ -0.82
CKAP2-201ENST00000258607 NOX5Q96PH1 765 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 TARS2Q9BW92 718 aaKnown RBP9.9□□□□□ -0.82
CKAP2-201ENST00000258607 EFCC1Q9HA90 598 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 RBM12Q9NTZ6 932 aaKnown RBP9.9□□□□□ -0.82
CKAP2-201ENST00000258607 NXF1Q9UBU9 619 aaKnown RBP9.9□□□□□ -0.82
CKAP2-201ENST00000258607 PPP1R9AQ9ULJ8 1098 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 FAN1Q9Y2M0 1017 aa9.9□□□□□ -0.82
CKAP2-201ENST00000258607 MYO7AQ13402 2215 aa9.9□□□□□ -0.83
CKAP2-201ENST00000258607 NHSQ6T4R5 1651 aa9.9□□□□□ -0.83
CKAP2-201ENST00000258607 POTEB2H3BUK9 544 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 NOL4O94818 638 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 TMOD1P28289 359 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 PSMC2P35998 433 aaKnown RBP9.89□□□□□ -0.83
CKAP2-201ENST00000258607 HDLBPQ00341 1268 aaKnown RBP9.89□□□□□ -0.83
CKAP2-201ENST00000258607 PPP3CAQ08209 521 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 BMS1Q14692 1282 aaKnown RBP9.89□□□□□ -0.83
CKAP2-201ENST00000258607 CC2D1AQ6P1N0 951 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms