RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TRIM60Q495X7 471 aa5.13□□□□□ -1.59
RC3H1-201ENST00000258349 ZNF589Q86UQ0 364 aaPredicted RBP5.13□□□□□ -1.59
RC3H1-201ENST00000258349 NLRP14Q86W24 1093 aa5.13□□□□□ -1.59
RC3H1-201ENST00000258349 DHX40Q8IX18 779 aaKnown RBP5.13□□□□□ -1.59
RC3H1-201ENST00000258349 TTC8Q8TAM2 541 aa5.13□□□□□ -1.59
RC3H1-201ENST00000258349 HSPH1Q92598 858 aa5.13□□□□□ -1.59
RC3H1-201ENST00000258349 SEPT8Q92599 483 aa5.13□□□□□ -1.59
RC3H1-201ENST00000258349 COG4Q9H9E3 785 aa5.13□□□□□ -1.59
RC3H1-201ENST00000258349 WDR70Q9NW82 654 aa5.13□□□□□ -1.59
RC3H1-201ENST00000258349 DUX4Q9UBX2 424 aa5.13□□□□□ -1.59
RC3H1-201ENST00000258349 TRAF3IP3Q9Y228 551 aa5.13□□□□□ -1.59
RC3H1-201ENST00000258349 SLC26A4O43511 780 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 DAB2IPQ5VWQ8 1189 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 NUGGCQ68CJ6 796 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 UNC13DQ70J99 1090 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 WDR75Q8IWA0 830 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 PPCSQ9HAB8 311 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 SEPT3Q9UH03 358 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 USP6P35125 1406 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 PLEKHG2Q9H7P9 1386 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 PFASO15067 1338 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 POTEB3A0JP26 581 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 CFLARO15519 480 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 ASAP2O43150 1006 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 IFNA8P32881 189 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 PSMD7P51665 324 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 IRX1P78414 480 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 TSTA3Q13630 321 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 DHX34Q14147 1143 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 POTEBQ6S5H4 581 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 GADL1Q6ZQY3 521 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 NUDCD3Q8IVD9 361 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 TBCKQ8TEA7 893 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 SLITRK6Q9H5Y7 841 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 TRIM45Q9H8W5 580 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 RPF1Q9H9Y2 349 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 KLC4Q9NSK0 619 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 LEMD3Q9Y2U8 911 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 SNX5Q9Y5X3 404 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 UBE4BO95155 1302 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 SNX2O60749 519 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 E2F6O75461 281 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 PAPOLAP51003 745 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 MAPRE2Q15555 327 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 RGS9BPQ6ZS82 235 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 NDUFAF2Q8N183 169 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 SPDYE2BA6NHP3 402 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 SPDYE6P0CI01 402 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 CCNE1P24864 410 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 NLRP11P59045 1033 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 CYP4A11Q02928 519 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 CHRNDQ07001 517 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 TRIP13Q15645 432 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 E2F4Q16254 413 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 FLAD1Q8NFF5 587 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 CYTH2Q99418 400 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 NEUROG2Q9H2A3 272 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 ADCK5Q3MIX3 580 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 TTLL11Q8NHH1 800 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 HEXIM2Q96MH2 286 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 KANSL2Q9H9L4 492 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 STX18Q9P2W9 335 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 THRAP3Q9Y2W1 955 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 TTC3P53804 2025 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 CCDC22O60826 627 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 PDE8BO95263 885 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 KRT16P08779 473 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 AP1B1Q10567 949 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 TBC1D9BQ66K14 1250 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 ARMCX2Q7L311 632 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 GRAMD1CQ8IYS0 662 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 TNIP2Q8NFZ5 429 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 FAM129AQ9BZQ8 928 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 CTIFO43310 598 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 HNRNPRO43390 633 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 DIAPH2O60879 1101 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 COBLO75128 1261 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 KRT7P08729 469 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 ZNF496Q96IT1 587 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 GCNAQ96QF7 691 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 SAMSN1Q9NSI8 373 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 SLC8A2Q9UPR5 921 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 CCDC195A0A1B0GUA6 201 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 FAM170AA1A519 330 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 UBAP1LF5GYI3 381 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 GOLGA8SH3BPF8 625 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 PPEF1O14829 653 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 HSPA9P38646 679 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 GYG1P46976 350 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 PMS2P54278 862 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 ANGPTL8Q6UXH0 198 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 RYBPQ8N488 228 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 ARMC2Q8NEN0 867 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 STAMBPL1Q96FJ0 436 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 VIPAS39Q9H9C1 493 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 CDV3Q9UKY7 258 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 TBX22Q9Y458 520 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 IFNAR1P17181 557 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 TTC39CQ8N584 583 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms