RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 DGAT1O75907 488 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 KCNJ6P48051 423 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 STAT5BP51692 787 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 MARSP56192 900 aaKnown RBP20.75■□□□□ 0.91
TRIM47-201ENST00000254816 TRIM50Q86XT4 487 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 CNGA4Q8IV77 575 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 PANX2Q96RD6 677 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 ERGIC2Q96RQ1 377 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 GPR20Q99678 358 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 GBP3Q9H0R5 595 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 MANSC4A6NHS7 340 aaPredicted RBP20.74■□□□□ 0.91
TRIM47-201ENST00000254816 GRB14Q14449 540 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 TAF1CQ15572 869 aaPredicted RBP20.74■□□□□ 0.91
TRIM47-201ENST00000254816 SYT10Q6XYQ8 523 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 PLEKHH3Q7Z736 793 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 ABRAQ8N0Z2 381 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 PDCL2Q8N4E4 241 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 AGPAT3Q9NRZ7 376 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 ABHD10Q9NUJ1 306 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.74■□□□□ 0.91
TRIM47-201ENST00000254816 NOP56O00567 594 aaKnown RBP20.74■□□□□ 0.91
TRIM47-201ENST00000254816 MAPTP10636 758 aaKnown RBP20.74■□□□□ 0.91
TRIM47-201ENST00000254816 RPL13P26373 211 aaKnown RBP20.74■□□□□ 0.91
TRIM47-201ENST00000254816 MARK3P27448 753 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 KRT9P35527 623 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 NPTX2P47972 431 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 NCKAP1LP55160 1127 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 TRIM14Q14142 442 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 SPATA33Q96N06 139 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 ATP6V0A4Q9HBG4 840 aa20.74■□□□□ 0.91
TRIM47-201ENST00000254816 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.74■□□□□ 0.917e-7■■□□□ 13
TRIM47-201ENST00000254816 V9GYY5 206 aaPredicted RBP20.74■□□□□ 0.91
TRIM47-201ENST00000254816 TRIM21P19474 475 aaKnown RBP20.73■□□□□ 0.91
TRIM47-201ENST00000254816 CYP2J2P51589 502 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 POLGP54098 1239 aaPredicted RBP20.73■□□□□ 0.91
TRIM47-201ENST00000254816 TTLL4Q14679 1199 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 TAPT1Q6NXT6 567 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 AGPAT5Q9NUQ2 364 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 ZNF215Q9UL58 517 aaPredicted RBP20.73■□□□□ 0.91
TRIM47-201ENST00000254816 SIK3Q9Y2K2 1263 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 LOC102724159A0A0B4J2E5 919 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 SOWAHDA6NJG2 315 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 STX10O60499 249 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 SLC10A3P09131 477 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 MTF1Q14872 753 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 PWP2Q15269 919 aaKnown RBP20.73■□□□□ 0.91
TRIM47-201ENST00000254816 FAM160B1Q5W0V3 765 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 HS2ST1Q7LGA3 356 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 TTYH3Q9C0H2 523 aa20.73■□□□□ 0.91
TRIM47-201ENST00000254816 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.73■□□□□ 0.91
TRIM47-201ENST00000254816 ADGRA2Q96PE1 1338 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 GTF2BQ00403 316 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 DMP1Q13316 513 aaPredicted RBP20.72■□□□□ 0.91
TRIM47-201ENST00000254816 EMC2Q15006 297 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 FRMD5Q7Z6J6 570 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 NPLOC4Q8TAT6 608 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 AFAP1L1Q8TED9 768 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 SCFD2Q8WU76 684 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 KIFAP3Q92845 792 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 GLG1Q92896 1179 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 TMEM143Q96AN5 459 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 POLR3FQ9H1D9 316 aaPredicted RBP20.72■□□□□ 0.91
TRIM47-201ENST00000254816 AZI2Q9H6S1 392 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 MMRN2Q9H8L6 949 aa20.72■□□□□ 0.91
TRIM47-201ENST00000254816 FAM207AQ9NSI2 230 aaPredicted RBP20.72■□□□□ 0.91
TRIM47-201ENST00000254816 ARMCX3Q9UH62 379 aaPredicted RBP20.72■□□□□ 0.91
TRIM47-201ENST00000254816 KIF2AO00139 706 aaPredicted RBP20.71■□□□□ 0.91
TRIM47-201ENST00000254816 EPHB6O15197 1021 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 ARHGAP6O43182 974 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 SNAI1O95863 264 aaPredicted RBP20.71■□□□□ 0.91
TRIM47-201ENST00000254816 EPB41P11171 864 aaKnown RBP20.71■□□□□ 0.91
TRIM47-201ENST00000254816 MAPK4P31152 587 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 KCNMA1Q12791 1236 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 MCPH1Q8NEM0 835 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 MAML3Q96JK9 1138 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 ACCSQ96QU6 501 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 PCIF1Q9H4Z3 704 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 KMT5AQ9NQR1 393 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 CAPN11Q9UMQ6 739 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 ADGRA3Q8IWK6 1321 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 ADCYAP1R1P41586 468 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 KCNH2Q12809 1159 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 GRM1Q13255 1194 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 DCAF17Q5H9S7 520 aaPredicted RBP20.71■□□□□ 0.91
TRIM47-201ENST00000254816 TOGARAM2Q6ZUX3 1019 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 IFNL1Q8IU54 200 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 TMEM161BQ8NDZ6 487 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 CEP89Q96ST8 783 aa20.71■□□□□ 0.91
TRIM47-201ENST00000254816 CCDC94Q9BW85 323 aaPredicted RBP20.71■□□□□ 0.91
TRIM47-201ENST00000254816 NIFKQ9BYG3 293 aaKnown RBP20.71■□□□□ 0.91
TRIM47-201ENST00000254816 GPBP1L1Q9HC44 474 aaPredicted RBP20.71■□□□□ 0.91
TRIM47-201ENST00000254816 DIS3Q9Y2L1 958 aaKnown RBP20.71■□□□□ 0.91
TRIM47-201ENST00000254816 LUC7L2Q9Y383 392 aaKnown RBP20.71■□□□□ 0.91
TRIM47-201ENST00000254816 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.7■□□□□ 0.9
TRIM47-201ENST00000254816 FAM155AB1AL88 458 aaPredicted RBP20.7■□□□□ 0.9
TRIM47-201ENST00000254816 SMTNP53814 917 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 ALCAMQ13740 583 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 NFIL3Q16649 462 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 CCDC51Q96ER9 411 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 CRACR2AQ9BSW2 395 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms