RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 USP11P51784 963 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 GUCY1A3Q02108 690 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 PDIA5Q14554 519 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 SLC18A3Q16572 532 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 CDCA5Q96FF9 252 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 EPN3Q9H201 632 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 POLD4Q9HCU8 107 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 PACSIN2Q9UNF0 486 aaPredicted RBP18.51■□□□□ 0.55
FOXA1-201ENST00000250448 RIPK3Q9Y572 518 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 CTDP1Q9Y5B0 961 aaPredicted RBP18.51■□□□□ 0.55
FOXA1-201ENST00000250448 GLTPD2A6NH11 291 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 TNNC1P63316 161 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 RAPGEF1Q13905 1077 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 ECM1Q16610 540 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 LENG9Q96B70 501 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 ATP6V1G3Q96LB4 118 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 PLCD4Q9BRC7 762 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 AFG3L2Q9Y4W6 797 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
FOXA1-201ENST00000250448 FOSP01100 380 aaPredicted RBP18.5■□□□□ 0.55
FOXA1-201ENST00000250448 GCFC2P16383 781 aaKnown RBP18.5■□□□□ 0.55
FOXA1-201ENST00000250448 FAM26FQ5R3K3 315 aa18.5■□□□□ 0.55
FOXA1-201ENST00000250448 NAA35Q5VZE5 725 aa18.5■□□□□ 0.55
FOXA1-201ENST00000250448 C1orf131Q8NDD1 294 aaKnown RBP18.5■□□□□ 0.55
FOXA1-201ENST00000250448 CLEC4DQ8WXI8 215 aa18.5■□□□□ 0.55
FOXA1-201ENST00000250448 DNAJC19Q96DA6 116 aa18.5■□□□□ 0.55
FOXA1-201ENST00000250448 L3MBTL3Q96JM7 780 aaPredicted RBP18.5■□□□□ 0.55
FOXA1-201ENST00000250448 CEP63Q96MT8 703 aa18.5■□□□□ 0.55
FOXA1-201ENST00000250448 POTECB2RU33 542 aa18.5■□□□□ 0.55
FOXA1-201ENST00000250448 PIK3CDO00329 1044 aa18.5■□□□□ 0.55
FOXA1-201ENST00000250448 RAD51CO43502 376 aa18.5■□□□□ 0.55
FOXA1-201ENST00000250448 PPP1R12BO60237 982 aaPredicted RBP18.5■□□□□ 0.55
FOXA1-201ENST00000250448 HNRNPH1P31943 449 aaKnown RBP18.5■□□□□ 0.55
FOXA1-201ENST00000250448 KCNV1Q6PIU1 500 aa18.5■□□□□ 0.55
FOXA1-201ENST00000250448 PAGR1Q9BTK6 254 aa18.5■□□□□ 0.55
FOXA1-201ENST00000250448 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.5■□□□□ 0.55
FOXA1-201ENST00000250448 A0A087X0T9 212 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 HMGB1P1B2RPK0 211 aaPredicted RBP18.49■□□□□ 0.55
FOXA1-201ENST00000250448 VWA5AO00534 786 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 PPP1R37O75864 691 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 FAM228BP0C875 321 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 HSPA9P38646 679 aaKnown RBP18.49■□□□□ 0.55
FOXA1-201ENST00000250448 PTGISQ16647 500 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 KIAA0753Q2KHM9 967 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 OTUD6BQ8N6M0 293 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 USP38Q8NB14 1042 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 OTUD5Q96G74 571 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 PACSIN1Q9BY11 444 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 MEFVO15553 781 aaPredicted RBP18.49■□□□□ 0.55
FOXA1-201ENST00000250448 MYBP10242 640 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 RNASE9P60153 205 aaKnown RBP18.49■□□□□ 0.55
FOXA1-201ENST00000250448 ASIC2Q16515 512 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 MICALCLQ6ZW33 695 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 TAF1DQ9H5J8 278 aaPredicted RBP18.49■□□□□ 0.55
FOXA1-201ENST00000250448 KCNMB3Q9NPA1 279 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 CAPN7Q9Y6W3 813 aa18.49■□□□□ 0.55
FOXA1-201ENST00000250448 LOC102724159A0A0B4J2E5 919 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 ARID5AQ03989 594 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 KLHL30Q0D2K2 578 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 PWP2Q15269 919 aaKnown RBP18.48■□□□□ 0.55
FOXA1-201ENST00000250448 TRADDQ15628 312 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 TREML2Q5T2D2 321 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 SWT1Q5T5J6 900 aaKnown RBP18.48■□□□□ 0.55
FOXA1-201ENST00000250448 MAATS1Q7Z4T9 603 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 TRIM59Q8IWR1 403 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 ZNF473Q8WTR7 871 aaKnown RBP18.48■□□□□ 0.55
FOXA1-201ENST00000250448 TAF4BQ92750 862 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 CEP89Q96ST8 783 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 ZNF408Q9H9D4 720 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 PANK4Q9NVE7 773 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 TMOD4Q9NZQ9 345 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 CLEC11AQ9Y240 323 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 PLAAQ9Y263 795 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.48■□□□□ 0.55
FOXA1-201ENST00000250448 CSADQ9Y600 493 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 CYP3A7-CYP3A51PA0A087WV96 503 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 MSH4O15457 936 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 GNA14O95837 355 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 CYP3A7P24462 503 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 NSMFQ6X4W1 530 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 USP50Q70EL3 339 aaPredicted RBP18.48■□□□□ 0.55
FOXA1-201ENST00000250448 KLHL7Q8IXQ5 586 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 FAM133AQ8N9E0 248 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 IL31RAQ8NI17 732 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 ETNPPLQ8TBG4 499 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 ZBED4O75132 1171 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 FSBPO95073 299 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 USP8P40818 1118 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 MDH1P40925 334 aaKnown RBP18.48■□□□□ 0.55
FOXA1-201ENST00000250448 NOL9Q5SY16 702 aaKnown RBP18.48■□□□□ 0.55
FOXA1-201ENST00000250448 FGFBP2Q9BYJ0 223 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 PKD2L1Q9P0L9 805 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 TMEM59LQ9UK28 342 aa18.48■□□□□ 0.55
FOXA1-201ENST00000250448 FNTAP49354 379 aa18.47■□□□□ 0.55
FOXA1-201ENST00000250448 MARSP56192 900 aaKnown RBP18.47■□□□□ 0.55
FOXA1-201ENST00000250448 ITGB3BPQ13352 177 aaPredicted RBP18.47■□□□□ 0.55
FOXA1-201ENST00000250448 PLS1Q14651 629 aa18.47■□□□□ 0.55
FOXA1-201ENST00000250448 ENOX2Q16206 610 aaKnown RBP18.47■□□□□ 0.55
FOXA1-201ENST00000250448 CEP85LQ5SZL2 805 aa18.47■□□□□ 0.55
FOXA1-201ENST00000250448 MAP1SQ66K74 1059 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms