RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 RGS18Q9NS28 235 aa23.67■■□□□ 1.38
HCFC1R1-201ENST00000248089 C1orf112Q9NSG2 853 aa23.67■■□□□ 1.38
HCFC1R1-201ENST00000248089 BMP2KQ9NSY1 1161 aaPredicted RBP23.67■■□□□ 1.38
HCFC1R1-201ENST00000248089 LMCD1Q9NZU5 365 aa23.67■■□□□ 1.38
HCFC1R1-201ENST00000248089 SUCLA2Q9P2R7 463 aaPredicted RBP23.67■■□□□ 1.38
HCFC1R1-201ENST00000248089 PCDHB7Q9Y5E2 793 aa23.67■■□□□ 1.38
HCFC1R1-201ENST00000248089 IGKV6-21A0A0C4DH24 114 aa23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 FGFR4P22455 802 aa23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 YWHABP31946 246 aaKnown RBP23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 POLGP54098 1239 aaPredicted RBP23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 SLC24A5Q71RS6 500 aa23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 RHPN2Q8IUC4 686 aa23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 C4orf19Q8IY42 314 aa23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 ZNF579Q8NAF0 562 aaKnown RBP23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 SLC7A3Q8WY07 619 aa23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 EIF2AK1Q9BQI3 630 aaKnown RBP23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 JPH2Q9BR39 696 aaPredicted RBP23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 ZSWIM4Q9H7M6 989 aa23.66■■□□□ 1.38
HCFC1R1-201ENST00000248089 H3BNC9 293 aa23.65■■□□□ 1.38
HCFC1R1-201ENST00000248089 DARSP14868 501 aaKnown RBP23.65■■□□□ 1.38
HCFC1R1-201ENST00000248089 CMTR2Q8IYT2 770 aaKnown RBP23.65■■□□□ 1.38
HCFC1R1-201ENST00000248089 CRIPAKQ8N1N5 446 aa23.65■■□□□ 1.38
HCFC1R1-201ENST00000248089 ATXN2LQ8WWM7 1075 aaKnown RBP23.65■■□□□ 1.38
HCFC1R1-201ENST00000248089 NLRP4Q96MN2 994 aa23.65■■□□□ 1.38
HCFC1R1-201ENST00000248089 MTMR9Q96QG7 549 aa23.65■■□□□ 1.38
HCFC1R1-201ENST00000248089 TMEM60Q9H2L4 133 aa23.65■■□□□ 1.38
HCFC1R1-201ENST00000248089 RWDD3Q9Y3V2 267 aa23.65■■□□□ 1.38
HCFC1R1-201ENST00000248089 MRPL42Q9Y6G3 142 aaKnown RBP23.65■■□□□ 1.38
HCFC1R1-201ENST00000248089 POTEMA6NI47 508 aa23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 C9IYK1 514 aa23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 CSDE1O75534 798 aaKnown RBP23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 CD2BP2O95400 341 aaKnown RBP23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 ZSCAN20P17040 1043 aaPredicted RBP23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 PTPROQ16827 1216 aa23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 XKR9Q5GH70 373 aa23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 TJAP1Q5JTD0 557 aa23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 FAM43BQ6ZT52 329 aaPredicted RBP23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 OTUD6AQ7L8S5 288 aa23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 NOSTRINQ8IVI9 506 aa23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 TBC1D32Q96NH3 1257 aa23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 GCOM2Q9BZD3 368 aaPredicted RBP23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 RNF216Q9NWF9 866 aaPredicted RBP23.64■■□□□ 1.37
HCFC1R1-201ENST00000248089 A0A087WZ62 844 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 ZBTB39O15060 712 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 LINC00271P0C7V0 271 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 BMPR1AP36894 532 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 RFC5P40937 340 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 MRPS5P82675 430 aaKnown RBP23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 TFF2Q03403 129 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 DSC3Q14574 896 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 ZNF174Q15697 407 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 TTC38Q5R3I4 469 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 KSR1Q8IVT5 923 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 NEK9Q8TD19 979 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 CLP1Q92989 425 aaKnown RBP23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 MRPL38Q96DV4 380 aaKnown RBP23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 TMX3Q96JJ7 454 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 FDXACB1Q9BRP7 624 aaPredicted RBP23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 C11orf84Q9BUA3 381 aaPredicted RBP23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 KIF3AQ9Y496 699 aa23.63■■□□□ 1.37
HCFC1R1-201ENST00000248089 TCF20Q9UGU0 1960 aaKnown RBP23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 SLITRK3O94933 977 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 CSPG5O95196 566 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 CDC42EP1Q00587 391 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 EMC2Q15006 297 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 ZNF410Q86VK4 478 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 IL27Q8NEV9 243 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 TMEM143Q96AN5 459 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 CCDC43Q96MW1 224 aaKnown RBP23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 ASB2Q96Q27 587 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 DHX33Q9H6R0 707 aaKnown RBP23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 ATP6V0A4Q9HBG4 840 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 NOL7Q9UMY1 257 aaKnown RBP23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 PPME1Q9Y570 386 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 COL4A3BPQ9Y5P4 624 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 PLXNA4Q9HCM2 1894 aa23.62■■□□□ 1.37
HCFC1R1-201ENST00000248089 BRWD1Q9NSI6 2320 aa23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 SPTBN5Q9NRC6 3674 aaKnown RBP23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 TBKBP1A7MCY6 615 aa23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 C5orf67F2Z3F1 127 aa23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 OR52Z1P0C646 297 aa23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 SFPQP23246 707 aaKnown RBP eCLIP23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 FAM102BQ5T8I3 360 aa23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 EXOC8Q8IYI6 725 aa23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 RNF169Q8NCN4 708 aa23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 PSPC1Q8WXF1 523 aaKnown RBP23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 TMEM161AQ9NX61 479 aa23.61■■□□□ 1.37
HCFC1R1-201ENST00000248089 RB1P06400 928 aa23.6■■□□□ 1.37
HCFC1R1-201ENST00000248089 FGFR1P11362 822 aa23.6■■□□□ 1.37
HCFC1R1-201ENST00000248089 NBR1Q14596 966 aa23.6■■□□□ 1.37
HCFC1R1-201ENST00000248089 TIGD5Q53EQ6 642 aa23.6■■□□□ 1.37
HCFC1R1-201ENST00000248089 SPOUT1Q5T280 376 aaKnown RBP23.6■■□□□ 1.37
HCFC1R1-201ENST00000248089 SYMPKQ92797 1274 aaKnown RBP23.6■■□□□ 1.37
HCFC1R1-201ENST00000248089 HSD17B14Q9BPX1 270 aa23.6■■□□□ 1.37
HCFC1R1-201ENST00000248089 MYO7AQ13402 2215 aa23.59■■□□□ 1.37
HCFC1R1-201ENST00000248089 GRM6O15303 877 aa23.59■■□□□ 1.37
HCFC1R1-201ENST00000248089 TECP42680 631 aa23.59■■□□□ 1.37
HCFC1R1-201ENST00000248089 ORC2Q13416 577 aaPredicted RBP23.59■■□□□ 1.37
HCFC1R1-201ENST00000248089 TCP11Q8WWU5 503 aa23.59■■□□□ 1.37
HCFC1R1-201ENST00000248089 HLA-CQ95604 372 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms