RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 METTL13Q8N6R0 699 aa18.17■□□□□ 0.5
CLPP-201ENST00000245816 KLHL23Q8NBE8 558 aa18.17■□□□□ 0.5
CLPP-201ENST00000245816 HAS1Q92839 578 aa18.17■□□□□ 0.5
CLPP-201ENST00000245816 FAM20AQ96MK3 541 aa18.17■□□□□ 0.5
CLPP-201ENST00000245816 TEKT3Q9BXF9 490 aa18.17■□□□□ 0.5
CLPP-201ENST00000245816 NSUN3Q9H649 340 aaKnown RBP18.17■□□□□ 0.5
CLPP-201ENST00000245816 C11orf16Q9NQ32 467 aa18.17■□□□□ 0.5
CLPP-201ENST00000245816 DDX25Q9UHL0 483 aaKnown RBP18.17■□□□□ 0.5
CLPP-201ENST00000245816 VAV3Q9UKW4 847 aa18.17■□□□□ 0.5
CLPP-201ENST00000245816 SAMM50Q9Y512 469 aa18.17■□□□□ 0.5
CLPP-201ENST00000245816 PLXNA4Q9HCM2 1894 aa18.17■□□□□ 0.5
CLPP-201ENST00000245816 IGKV6-21A0A0C4DH24 114 aa18.16■□□□□ 0.5
CLPP-201ENST00000245816 GRXCR2A6NFK2 248 aa18.16■□□□□ 0.5
CLPP-201ENST00000245816 CSDE1O75534 798 aaKnown RBP18.16■□□□□ 0.5
CLPP-201ENST00000245816 FGFR1P11362 822 aa18.16■□□□□ 0.5
CLPP-201ENST00000245816 SAFBQ15424 915 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLPP-201ENST00000245816 PTPROQ16827 1216 aa18.16■□□□□ 0.5
CLPP-201ENST00000245816 LRRC55Q6ZSA7 311 aa18.16■□□□□ 0.5
CLPP-201ENST00000245816 PIK3AP1Q6ZUJ8 805 aa18.16■□□□□ 0.5
CLPP-201ENST00000245816 FAM178BQ8IXR5 827 aa18.16■□□□□ 0.5
CLPP-201ENST00000245816 PABPC5Q96DU9 382 aaKnown RBP18.16■□□□□ 0.5
CLPP-201ENST00000245816 CWH43Q9H720 699 aa18.16■□□□□ 0.5
CLPP-201ENST00000245816 KCNMB3Q9NPA1 279 aa18.16■□□□□ 0.5
CLPP-201ENST00000245816 KIF3AQ9Y496 699 aa18.16■□□□□ 0.5
CLPP-201ENST00000245816 GPC3P51654 580 aa18.15■□□□□ 0.5
CLPP-201ENST00000245816 JAK3P52333 1124 aa18.15■□□□□ 0.5
CLPP-201ENST00000245816 LETM2Q2VYF4 491 aa18.15■□□□□ 0.5
CLPP-201ENST00000245816 TIGD5Q53EQ6 642 aa18.15■□□□□ 0.5
CLPP-201ENST00000245816 FAM43BQ6ZT52 329 aaPredicted RBP18.15■□□□□ 0.5
CLPP-201ENST00000245816 ANO5Q75V66 913 aa18.15■□□□□ 0.5
CLPP-201ENST00000245816 DIS3L2Q8IYB7 885 aaKnown RBP18.15■□□□□ 0.5
CLPP-201ENST00000245816 C11orf84Q9BUA3 381 aaPredicted RBP18.15■□□□□ 0.5
CLPP-201ENST00000245816 NIFKQ9BYG3 293 aaKnown RBP18.15■□□□□ 0.5
CLPP-201ENST00000245816 MAGEB2O15479 319 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 TBX10O75333 385 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 NR5A1Q13285 461 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 PTCRAQ6ISU1 281 aaPredicted RBP18.14■□□□□ 0.49
CLPP-201ENST00000245816 SLC24A5Q71RS6 500 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 MIER3Q7Z3K6 550 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 FAM184AQ8NB25 1140 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 FBXO18Q8NFZ0 1043 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 P2RX5Q93086 422 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 C8orf76Q96K31 380 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 PLVAPQ9BX97 442 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 LMAN2LQ9H0V9 348 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 FOXP1Q9H334 677 aaPredicted RBP18.14■□□□□ 0.49
CLPP-201ENST00000245816 NRBP2Q9NSY0 501 aa18.14■□□□□ 0.49
CLPP-201ENST00000245816 TYW1Q9NV66 732 aaKnown RBP18.14■□□□□ 0.49
CLPP-201ENST00000245816 BTBD18B2RXH4 712 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 GPR182O15218 404 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 STAG3L1P0CL83 205 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 ATF7P17544 494 aaPredicted RBP18.13■□□□□ 0.49
CLPP-201ENST00000245816 RBM10P98175 930 aaKnown RBP18.13■□□□□ 0.49
CLPP-201ENST00000245816 SPIRE1Q08AE8 756 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 MTERF2Q49AM1 385 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 SLFN12Q8IYM2 578 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 POF1BQ8WVV4 589 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 TMX3Q96JJ7 454 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 FAM167AQ96KS9 214 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 CASD1Q96PB1 797 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 AKT3Q9Y243 479 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 PCDHB7Q9Y5E2 793 aa18.13■□□□□ 0.49
CLPP-201ENST00000245816 TBKBP1A7MCY6 615 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 ZBTB39O15060 712 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 CCNT1O60563 726 aaKnown RBP18.12■□□□□ 0.49
CLPP-201ENST00000245816 DARSP14868 501 aaKnown RBP18.12■□□□□ 0.49
CLPP-201ENST00000245816 COL9A1P20849 921 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 EIF4BP23588 611 aaKnown RBP18.12■□□□□ 0.49
CLPP-201ENST00000245816 NPEPPSP55786 919 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 PPP2R5CQ13362 524 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 ORC2Q13416 577 aaPredicted RBP18.12■□□□□ 0.49
CLPP-201ENST00000245816 ADAM15Q13444 863 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 PLA2G4FQ68DD2 849 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 ZNF598Q86UK7 904 aaKnown RBP18.12■□□□□ 0.49
CLPP-201ENST00000245816 KSR1Q8IVT5 923 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 CLDND1Q9NY35 253 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 CLEC1BQ9P126 229 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 CEP131Q9UPN4 1083 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 RWDD3Q9Y3V2 267 aa18.12■□□□□ 0.49
CLPP-201ENST00000245816 DENND3A2RUS2 1198 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 BAG4O95429 457 aaKnown RBP18.11■□□□□ 0.49
CLPP-201ENST00000245816 GLP2RO95838 553 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 ERVFC1P60507 584 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 CLUL1Q15846 466 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 XKR3Q5GH77 459 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 CLLU1OSQ5K130 101 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 ZNF710Q8N1W2 664 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 VN1R2Q8NFZ6 395 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 IGFLR1Q9H665 355 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 C1orf112Q9NSG2 853 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 TMEM161AQ9NX61 479 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 SEPT9Q9UHD8 586 aaPredicted RBP18.11■□□□□ 0.49
CLPP-201ENST00000245816 LRFN2Q9ULH4 789 aa18.11■□□□□ 0.49
CLPP-201ENST00000245816 TRIOO75962 3097 aa18.1■□□□□ 0.49
CLPP-201ENST00000245816 A0A087WZ62 844 aa18.1■□□□□ 0.49
CLPP-201ENST00000245816 DKC1O60832 514 aaKnown RBP eCLIP18.1■□□□□ 0.49
CLPP-201ENST00000245816 MAFO75444 373 aaPredicted RBP18.1■□□□□ 0.49
CLPP-201ENST00000245816 PBX3P40426 434 aa18.1■□□□□ 0.49
CLPP-201ENST00000245816 ECHDC2Q86YB7 292 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms