RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 ZBTB10Q96DT7 871 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 CCSER1Q9C0I3 900 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.41
SOX9-201ENST00000245479 TNFAIP3P21580 790 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 GCLMP48507 274 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 HAUS3Q68CZ6 603 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 APTXQ7Z2E3 356 aaKnown RBP12.46□□□□□ -0.41
SOX9-201ENST00000245479 MSL3Q8N5Y2 521 aaKnown RBP12.46□□□□□ -0.41
SOX9-201ENST00000245479 KAT2BQ92831 832 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 SMC6Q96SB8 1091 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 REEP2Q9BRK0 252 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 K7ENM7 598 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
SOX9-201ENST00000245479 EN1Q05925 392 aaPredicted RBP12.46□□□□□ -0.41
SOX9-201ENST00000245479 SNX1Q13596 522 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 PPP4R3AQ6IN85 833 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 KDM7AQ6ZMT4 941 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 C4orf32Q8N8J7 132 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 MTMR8Q96EF0 704 aa12.46□□□□□ -0.41
SOX9-201ENST00000245479 MESDQ14696 234 aa12.46□□□□□ -0.42
SOX9-201ENST00000245479 PAPD7Q5XG87 772 aaKnown RBP12.46□□□□□ -0.42
SOX9-201ENST00000245479 OTUD6AQ7L8S5 288 aa12.46□□□□□ -0.42
SOX9-201ENST00000245479 CATSPER3Q86XQ3 398 aa12.46□□□□□ -0.42
SOX9-201ENST00000245479 COL23A1Q86Y22 540 aaPredicted RBP12.46□□□□□ -0.42
SOX9-201ENST00000245479 PRPF38AQ8NAV1 312 aaKnown RBP12.46□□□□□ -0.42
SOX9-201ENST00000245479 PDGFDQ9GZP0 370 aaPredicted RBP12.46□□□□□ -0.42
SOX9-201ENST00000245479 PI4KBQ9UBF8 816 aa12.46□□□□□ -0.42
SOX9-201ENST00000245479 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 CPP00450 1065 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 LRRC23Q53EV4 343 aaPredicted RBP12.45□□□□□ -0.42
SOX9-201ENST00000245479 AK8Q96MA6 479 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 ZNF577Q9BSK1 485 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 GLIS2Q9BZE0 524 aaPredicted RBP12.45□□□□□ -0.42
SOX9-201ENST00000245479 MLXIPLQ9NP71 852 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 TMOD4Q9NZQ9 345 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 FRMD4BQ9Y2L6 1034 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 EIF3BP55884 814 aaKnown RBP12.45□□□□□ -0.42
SOX9-201ENST00000245479 SLC10A5Q5PT55 438 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 ALKBH5Q6P6C2 394 aaKnown RBP12.45□□□□□ -0.42
SOX9-201ENST00000245479 UBL4BQ8N7F7 174 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 RAVER2Q9HCJ3 691 aaKnown RBP12.45□□□□□ -0.42
SOX9-201ENST00000245479 FSBPO95073 299 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 KRT15P19012 456 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 PDE6CP51160 858 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 HP1BP3Q5SSJ5 553 aaPredicted RBP12.45□□□□□ -0.42
SOX9-201ENST00000245479 GDAP1Q8TB36 358 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 SPZ1Q9BXG8 430 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 CELF4Q9BZC1 486 aaKnown RBP12.45□□□□□ -0.42
SOX9-201ENST00000245479 CCPG1Q9ULG6 757 aa12.45□□□□□ -0.42
SOX9-201ENST00000245479 KIF3CO14782 793 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 CTNNA2P26232 953 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 ALDH1B1P30837 517 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 PLCB4Q15147 1175 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 GPATCH4Q5T3I0 446 aaKnown RBP12.44□□□□□ -0.42
SOX9-201ENST00000245479 SYDE2Q5VT97 1194 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 FYB2Q5VWT5 728 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 SALL4Q9UJQ4 1053 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 IKBKGQ9Y6K9 419 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 ZNF263O14978 683 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 DAPK3O43293 454 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 SHMT1P34896 483 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 SLC30A9Q6PML9 568 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 AGBL1Q96MI9 1066 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 RUSC1Q9BVN2 902 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 IQCGQ9H095 443 aaKnown RBP12.44□□□□□ -0.42
SOX9-201ENST00000245479 SH2D4AQ9H788 454 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 GPRC5CQ9NQ84 441 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 PARP2Q9UGN5 583 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 MYO5AQ9Y4I1 1855 aaKnown RBP12.44□□□□□ -0.42
SOX9-201ENST00000245479 CFAP73A6NFT4 308 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 RASGRF2O14827 1237 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 ZBTB7AO95365 584 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 SCTRP47872 440 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 HHATQ5VTY9 493 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 FAM186BQ8IYM0 893 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 PBKQ96KB5 322 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 CALR3Q96L12 384 aaKnown RBP12.44□□□□□ -0.42
SOX9-201ENST00000245479 DDX23Q9BUQ8 820 aaKnown RBP12.44□□□□□ -0.42
SOX9-201ENST00000245479 ZNF341Q9BYN7 854 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 COA1Q9GZY4 146 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 NT5C3AQ9H0P0 336 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 AMACRQ9UHK6 382 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 SCOCQ9UIL1 159 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 USH1CQ9Y6N9 552 aa12.44□□□□□ -0.42
SOX9-201ENST00000245479 FAM86B1E9PN63 330 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 PEX10O60683 326 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 FAM86B2P0C5J1 330 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 VPS72Q15906 364 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 PPP2R5EQ16537 467 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 ZNF449Q6P9G9 518 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 GBP7Q8N8V2 638 aaPredicted RBP12.43□□□□□ -0.42
SOX9-201ENST00000245479 TSEN2Q8NCE0 465 aaKnown RBP12.43□□□□□ -0.42
SOX9-201ENST00000245479 RUBCNQ92622 972 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 OSBPL1AQ9BXW6 950 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 SH3GLB2Q9NR46 395 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 TRPC5Q9UL62 973 aaPredicted RBP12.43□□□□□ -0.42
SOX9-201ENST00000245479 PTK2Q05397 1052 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 TTLL12Q14166 644 aaPredicted RBP12.43□□□□□ -0.42
SOX9-201ENST00000245479 ZNF394Q53GI3 561 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 XKR9Q5GH70 373 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms