RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 MSTO1Q9BUK6 570 aa21.28■■□□□ 1
SOX4-201ENST00000244745 NCF2P19878 526 aaPredicted RBP21.27■■□□□ 1
SOX4-201ENST00000244745 TUBE1Q9UJT0 475 aa21.27■■□□□ 1
SOX4-201ENST00000244745 SNX12Q9UMY4 172 aa21.27■■□□□ 1
SOX4-201ENST00000244745 PNPLA7Q6ZV29 1317 aa21.27■■□□□ 1
SOX4-201ENST00000244745 PRPSAP2O60256 369 aa21.27■■□□□ 1
SOX4-201ENST00000244745 GPC4O75487 556 aa21.27■■□□□ 1
SOX4-201ENST00000244745 KRT3P12035 628 aa21.27■■□□□ 1
SOX4-201ENST00000244745 KCNB1Q14721 858 aa21.27■■□□□ 1
SOX4-201ENST00000244745 MXD3Q9BW11 206 aa21.27■■□□□ 1
SOX4-201ENST00000244745 PPRC1Q5VV67 1664 aaKnown RBP21.27■■□□□ 1
SOX4-201ENST00000244745 FDPSP14324 419 aaKnown RBP21.27■■□□□ 1
SOX4-201ENST00000244745 NT5C2P49902 561 aa21.27■■□□□ 1
SOX4-201ENST00000244745 CAPRIN2Q6IMN6 1127 aaKnown RBP21.27■■□□□ 1
SOX4-201ENST00000244745 SCINQ9Y6U3 715 aa21.27■■□□□ 1
SOX4-201ENST00000244745 ITIH6Q6UXX5 1313 aa21.27■■□□□ 1
SOX4-201ENST00000244745 MEFVO15553 781 aaPredicted RBP21.27■■□□□ 1
SOX4-201ENST00000244745 TJP3O95049 919 aa21.27■■□□□ 1
SOX4-201ENST00000244745 ABL1P00519 1130 aa21.27■■□□□ 1
SOX4-201ENST00000244745 PSMA2P25787 234 aa21.27■■□□□ 1
SOX4-201ENST00000244745 GUF1Q8N442 669 aaKnown RBP21.27■■□□□ 1
SOX4-201ENST00000244745 ZNF564Q8TBZ8 553 aaPredicted RBP21.27■■□□□ 1
SOX4-201ENST00000244745 TRIM56Q9BRZ2 755 aaKnown RBP21.27■■□□□ 1
SOX4-201ENST00000244745 GOLGA8MH3BSY2 632 aa21.27■□□□□ 0.99
SOX4-201ENST00000244745 ANTXR2P58335 489 aa21.27■□□□□ 0.99
SOX4-201ENST00000244745 BIRC2Q13490 618 aa21.27■□□□□ 0.99
SOX4-201ENST00000244745 ZNF746Q6NUN9 644 aaPredicted RBP21.27■□□□□ 0.99
SOX4-201ENST00000244745 PPP1R18Q6NYC8 613 aa21.27■□□□□ 0.99
SOX4-201ENST00000244745 ADGRF4Q8IZF3 695 aa21.27■□□□□ 0.99
SOX4-201ENST00000244745 ZNF473Q8WTR7 871 aaKnown RBP21.27■□□□□ 0.99
SOX4-201ENST00000244745 G3BP2Q9UN86 482 aaKnown RBP21.27■□□□□ 0.99
SOX4-201ENST00000244745 ZC3H13Q5T200 1668 aaKnown RBP21.27■□□□□ 0.99
SOX4-201ENST00000244745 SRRM1Q8IYB3 904 aaKnown RBP21.26■□□□□ 0.99
SOX4-201ENST00000244745 NLGN1Q8N2Q7 840 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 PPP1R16BQ96T49 567 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 TTC17Q96AE7 1141 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 SENP2Q9HC62 589 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 UTYO14607 1347 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 ZNF233A6NK53 670 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 CYP19A1P11511 503 aaPredicted RBP21.26■□□□□ 0.99
SOX4-201ENST00000244745 LRRC14Q15048 493 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 DNAAF3Q8N9W5 541 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 EPN3Q9H201 632 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 FAM149B1Q96BN6 582 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 HEXIM2Q96MH2 286 aaKnown RBP21.26■□□□□ 0.99
SOX4-201ENST00000244745 OSBPL1AQ9BXW6 950 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 ADD3Q9UEY8 706 aaKnown RBP21.26■□□□□ 0.99
SOX4-201ENST00000244745 USP31Q70CQ4 1352 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 INO80Q9ULG1 1556 aaPredicted RBP21.26■□□□□ 0.99
SOX4-201ENST00000244745 PHEXP78562 749 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 CDO1Q16878 200 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 ERICH1Q86X53 443 aa21.26■□□□□ 0.99
SOX4-201ENST00000244745 EIF3HO15372 352 aaKnown RBP eCLIP21.25■□□□□ 0.99
SOX4-201ENST00000244745 GH2P01242 217 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 ARMC2Q8NEN0 867 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 FAF2Q96CS3 445 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 MRPL46Q9H2W6 279 aaKnown RBP21.25■□□□□ 0.99
SOX4-201ENST00000244745 AGPAT5Q9NUQ2 364 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 ABCB11O95342 1321 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 TMEM179Q6ZVK1 233 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 MCUQ8NE86 351 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 CHMP6Q96FZ7 201 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 VIPAS39Q9H9C1 493 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 EPS15L1Q9UBC2 864 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 HPCAL4Q9UM19 191 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 CFAP73A6NFT4 308 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 ATP5HO75947 161 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 ESRRGP62508 458 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 ORC2Q13416 577 aaPredicted RBP21.25■□□□□ 0.99
SOX4-201ENST00000244745 SYT2Q8N9I0 419 aaPredicted RBP21.25■□□□□ 0.99
SOX4-201ENST00000244745 TMEM60Q9H2L4 133 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 YY1AP1Q9H869 796 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 STMN1P16949 149 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 ABCD1P33897 745 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 FLAD1Q8NFF5 587 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 PSD3Q9NYI0 1048 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 ADAM22Q9P0K1 906 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 ZFP69BQ9UJL9 534 aa21.25■□□□□ 0.99
SOX4-201ENST00000244745 ORC4O43929 436 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 FTLP02792 175 aaPredicted RBP21.24■□□□□ 0.99
SOX4-201ENST00000244745 ZBTB17Q13105 803 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 PADI6Q6TGC4 694 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 CLEC4GQ6UXB4 293 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 NYAP1Q6ZVC0 841 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 FAM160B2Q86V87 743 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 COL15A1P39059 1388 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 FAM196BA6NMK8 535 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 SPAG7O75391 227 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 ATG16L1Q676U5 607 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 PDIK1LQ8N165 341 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 COA1Q9GZY4 146 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 C7orf31Q8N865 590 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.24■□□□□ 0.99
SOX4-201ENST00000244745 SLC16A4O15374 487 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 GYG2O15488 501 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 SRGNP10124 158 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 ARL4AP40617 200 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 DRP2Q13474 957 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 NAALADL2Q58DX5 795 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 AMACRQ9UHK6 382 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms