RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 FXR1P51114 621 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDHD3-201ENST00000238379 RTP1P59025 263 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 ARHGAP1Q07960 439 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 SREBF2Q12772 1141 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 SPIRE2Q8WWL2 714 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 BSNDQ8WZ55 320 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 ERGIC2Q96RQ1 377 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 ZIC5Q96T25 663 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 TINF2Q9BSI4 451 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 DHX33Q9H6R0 707 aaKnown RBP16.73■□□□□ 0.27
HDHD3-201ENST00000238379 AGPAT3Q9NRZ7 376 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 NRBP2Q9NSY0 501 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 EMSYQ7Z589 1322 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 CLIC2O15247 247 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 SLC16A4O15374 487 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 AKAP3O75969 853 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 CASP14P31944 242 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 TRIM14Q14142 442 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 SYCP1Q15431 976 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 HS2ST1Q7LGA3 356 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 PLPPR4Q7Z2D5 763 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 TMEM139Q8IV31 216 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 SLC17A8Q8NDX2 589 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 CCDC112Q8NEF3 446 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 CPLX3Q8WVH0 158 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 TMEM206Q9H813 350 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 ZFYVE28Q9HCC9 887 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 SLC5A4Q9NY91 659 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 RNF225M0QZC1 329 aaPredicted RBP16.72■□□□□ 0.27
HDHD3-201ENST00000238379 MFAP3LO75121 409 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 ADCYAP1R1P41586 468 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 SMTNP53814 917 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 POLGP54098 1239 aaPredicted RBP16.72■□□□□ 0.27
HDHD3-201ENST00000238379 MAP2K5Q13163 448 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 DMP1Q13316 513 aaPredicted RBP16.72■□□□□ 0.27
HDHD3-201ENST00000238379 LAMC2Q13753 1193 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 NOLC1Q14978 699 aaKnown RBP eCLIP16.72■□□□□ 0.27
HDHD3-201ENST00000238379 EMC2Q15006 297 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 GJC2Q5T442 439 aaPredicted RBP16.72■□□□□ 0.27
HDHD3-201ENST00000238379 FRMD5Q7Z6J6 570 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 TRIM50Q86XT4 487 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 MSL3Q8N5Y2 521 aaKnown RBP16.72■□□□□ 0.27
HDHD3-201ENST00000238379 TMEM161BQ8NDZ6 487 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 GOLGA5Q8TBA6 731 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 GLG1Q92896 1179 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 ACCSQ96QU6 501 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 PANX2Q96RD6 677 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 ABHD16BQ9H3Z7 469 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 SPTLC3Q9NUV7 552 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 DMAC2Q9NW81 257 aa16.72■□□□□ 0.27
HDHD3-201ENST00000238379 RASSF10A6NK89 507 aa16.71■□□□□ 0.27
HDHD3-201ENST00000238379 SLC16A3O15427 465 aaKnown RBP16.71■□□□□ 0.27
HDHD3-201ENST00000238379 GH1P01241 217 aa16.71■□□□□ 0.27
HDHD3-201ENST00000238379 HOXC6P09630 235 aa16.71■□□□□ 0.27
HDHD3-201ENST00000238379 CASP4P49662 377 aa16.71■□□□□ 0.27
HDHD3-201ENST00000238379 CRHR2Q13324 411 aa16.71■□□□□ 0.27
HDHD3-201ENST00000238379 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
HDHD3-201ENST00000238379 FAM167AQ96KS9 214 aa16.71■□□□□ 0.27
HDHD3-201ENST00000238379 CCDC169A6NNP5 214 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 NRDCO43847 1150 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 ECM2O94769 699 aaPredicted RBP16.7■□□□□ 0.26
HDHD3-201ENST00000238379 RFC5P40937 340 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 KLK7P49862 253 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 SLC26A2P50443 739 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 ACVR2BQ13705 512 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 CNGA4Q8IV77 575 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 SLC9A9Q8IVB4 645 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 ATP8B4Q8TF62 1192 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 TMEM174Q8WUU8 243 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 SLC7A3Q8WY07 619 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 BBXQ8WY36 941 aaPredicted RBP16.7■□□□□ 0.26
HDHD3-201ENST00000238379 USP6NLQ92738 828 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 EMID1Q96A84 441 aaPredicted RBP16.7■□□□□ 0.26
HDHD3-201ENST00000238379 BORCS6Q96GS4 357 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 KIFC3Q9BVG8 833 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 POLR3FQ9H1D9 316 aaPredicted RBP16.7■□□□□ 0.26
HDHD3-201ENST00000238379 KMT5AQ9NQR1 393 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 ARMCX3Q9UH62 379 aaPredicted RBP16.7■□□□□ 0.26
HDHD3-201ENST00000238379 FAM184BQ9ULE4 1060 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 SIK3Q9Y2K2 1263 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.7■□□□□ 0.26
HDHD3-201ENST00000238379 DOCK3Q8IZD9 2030 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.7■□□□□ 0.26
HDHD3-201ENST00000238379 TOMM70O94826 608 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 TPM1P09493 284 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 MARK3P27448 753 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 KCNJ6P48051 423 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 MYBPC2Q14324 1141 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 PLCB4Q15147 1175 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 RETREG2Q8NC44 543 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 HVCN1Q96D96 273 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 CCDC51Q96ER9 411 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 BAG1Q99933 345 aaPredicted RBP16.7■□□□□ 0.26
HDHD3-201ENST00000238379 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 TTYH3Q9C0H2 523 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 SMARCAD1Q9H4L7 1026 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 METTL14Q9HCE5 456 aaKnown RBP16.7■□□□□ 0.26
HDHD3-201ENST00000238379 TBX20Q9UMR3 447 aa16.7■□□□□ 0.26
HDHD3-201ENST00000238379 PPME1Q9Y570 386 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms