RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 POLGP54098 1239 aaPredicted RBP14.02□□□□□ -0.16
MSH2-201ENST00000233146 YARSP54577 528 aaKnown RBP14.02□□□□□ -0.16
MSH2-201ENST00000233146 PTPN12Q05209 780 aaKnown RBP14.02□□□□□ -0.16
MSH2-201ENST00000233146 AUHQ13825 339 aaKnown RBP14.02□□□□□ -0.16
MSH2-201ENST00000233146 SLC29A2Q14542 456 aa14.02□□□□□ -0.16
MSH2-201ENST00000233146 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.02□□□□□ -0.16
MSH2-201ENST00000233146 THOC7Q6I9Y2 204 aaKnown RBP14.02□□□□□ -0.16
MSH2-201ENST00000233146 C3orf62Q6ZUJ4 267 aa14.02□□□□□ -0.16
MSH2-201ENST00000233146 C3orf67Q6ZVT6 689 aa14.02□□□□□ -0.16
MSH2-201ENST00000233146 DNAJC1Q96KC8 554 aaKnown RBP14.02□□□□□ -0.16
MSH2-201ENST00000233146 SNX27Q96L92 541 aa14.02□□□□□ -0.16
MSH2-201ENST00000233146 BTBD7Q9P203 1132 aa14.02□□□□□ -0.16
MSH2-201ENST00000233146 KIAA1522Q9P206 1035 aaPredicted RBP14.02□□□□□ -0.16
MSH2-201ENST00000233146 CHKBQ9Y259 395 aa14.02□□□□□ -0.16
MSH2-201ENST00000233146 MYH4Q9Y623 1939 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 WNT7AO00755 349 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 KRT36O76013 467 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 KRT38O76015 456 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 IFNAR1P17181 557 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 NEK3P51956 506 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 POU5F1Q01860 360 aaKnown RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 ITGA9Q13797 1035 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 CYLC2Q14093 348 aaPredicted RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 HGSNATQ68CP4 663 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 GRAMD4Q6IC98 578 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 RFWD3Q6PCD5 774 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 DAAM2Q86T65 1068 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 ST13P4Q8IZP2 240 aaPredicted RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 MGARPQ8TDB4 240 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 NMD3Q96D46 503 aaKnown RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 CNOT6LQ96LI5 555 aaKnown RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 STX18Q9P2W9 335 aaKnown RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 ZNF212Q9UDV6 495 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 DENND2AQ9ULE3 1009 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 ZNF213O14771 459 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 ITGA4P13612 1032 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 RGS2P41220 211 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 MEX3CQ5U5Q3 659 aaKnown RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 UNC13DQ70J99 1090 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 RRAGAQ7L523 313 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 PTF1AQ7RTS3 328 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 CSGALNACT2Q8N6G5 542 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 EPS8L3Q8TE67 593 aaKnown RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 DQX1Q8TE96 717 aaKnown RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 BAP1Q92560 729 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 ANKS1AQ92625 1134 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 NUDT16Q96DE0 195 aaKnown RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 DYDC2Q96IM9 177 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 CELF4Q9BZC1 486 aaKnown RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 CUEDC2Q9H467 287 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 NLRC4Q9NPP4 1024 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 FAIMQ9NVQ4 179 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 NOC2LQ9Y3T9 749 aaKnown RBP14.02□□□□□ -0.17
MSH2-201ENST00000233146 ZNF711Q9Y462 761 aa14.02□□□□□ -0.17
MSH2-201ENST00000233146 KIDINS220Q9ULH0 1771 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 NCKAP5LQ9HCH0 1330 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 PLEKHG1Q9ULL1 1385 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 KANSL1LA0AUZ9 987 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 KRIT1O00522 736 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 MTIF2P46199 727 aaKnown RBP14.01□□□□□ -0.17
MSH2-201ENST00000233146 USP11P51784 963 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 MFSD5Q6N075 450 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 CCDC113Q9H0I3 377 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.01□□□□□ -0.17
MSH2-201ENST00000233146 SLIT1O75093 1534 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 IPO5O00410 1097 aaKnown RBP14.01□□□□□ -0.17
MSH2-201ENST00000233146 PSMA7O14818 248 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 BCL2A1Q16548 175 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 OGFOD1Q8N543 542 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 GAB3Q8WWW8 586 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 PYM1Q9BRP8 204 aaKnown RBP14.01□□□□□ -0.17
MSH2-201ENST00000233146 NDUFA13Q9P0J0 144 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 DBR1Q9UK59 544 aaKnown RBP14.01□□□□□ -0.17
MSH2-201ENST00000233146 NALCNQ8IZF0 1738 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 UMODL1Q5DID0 1318 aa14.01□□□□□ -0.17
MSH2-201ENST00000233146 TMEM120BA0PK00 339 aa14□□□□□ -0.17
MSH2-201ENST00000233146 PSMG1O95456 288 aa14□□□□□ -0.17
MSH2-201ENST00000233146 PTPN4P29074 926 aa14□□□□□ -0.17
MSH2-201ENST00000233146 KLRC3Q07444 240 aa14□□□□□ -0.17
MSH2-201ENST00000233146 ACSBG2Q5FVE4 666 aa14□□□□□ -0.17
MSH2-201ENST00000233146 VSTM1Q6UX27 236 aa14□□□□□ -0.17
MSH2-201ENST00000233146 DSTYKQ6XUX3 929 aa14□□□□□ -0.17
MSH2-201ENST00000233146 IQCF2Q8IXL9 164 aa14□□□□□ -0.17
MSH2-201ENST00000233146 TGS1Q96RS0 853 aaKnown RBP14□□□□□ -0.17
MSH2-201ENST00000233146 TRAIPQ9BWF2 469 aa14□□□□□ -0.17
MSH2-201ENST00000233146 TIMMDC1Q9NPL8 285 aa14□□□□□ -0.17
MSH2-201ENST00000233146 HESX1Q9UBX0 185 aa14□□□□□ -0.17
MSH2-201ENST00000233146 FAM205CA6NFA0 338 aa14□□□□□ -0.17
MSH2-201ENST00000233146 PDE1BQ01064 536 aa14□□□□□ -0.17
MSH2-201ENST00000233146 SOGA3Q5TF21 947 aa14□□□□□ -0.17
MSH2-201ENST00000233146 SGMS1Q86VZ5 419 aa14□□□□□ -0.17
MSH2-201ENST00000233146 TRIM50Q86XT4 487 aa14□□□□□ -0.17
MSH2-201ENST00000233146 GPIHBP1Q8IV16 184 aa14□□□□□ -0.17
MSH2-201ENST00000233146 LRRC37BQ96QE4 947 aa14□□□□□ -0.17
MSH2-201ENST00000233146 CRAMP1Q96RY5 1269 aa14□□□□□ -0.17
MSH2-201ENST00000233146 SRPK1Q96SB4 655 aaKnown RBP14□□□□□ -0.17
MSH2-201ENST00000233146 HNRNPABQ99729 332 aaKnown RBP14□□□□□ -0.17
MSH2-201ENST00000233146 MYL10Q9BUA6 226 aa14□□□□□ -0.17
MSH2-201ENST00000233146 POLR3CQ9BUI4 534 aaPredicted RBP14□□□□□ -0.17
MSH2-201ENST00000233146 FAM207AQ9NSI2 230 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms