RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PNMA6AP0CW24 399 aaPredicted RBP12.35□□□□□ -0.43
LAMA4-201ENST00000230538 ZNF699Q32M78 642 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 FAM182BQ5T319 152 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 TBC1D9BQ66K14 1250 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 DGKHQ86XP1 1220 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 SNX19Q92543 992 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 MTRQ99707 1265 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 HEMGNQ9BXL5 484 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 TMEM247A6NEH6 219 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 PI4K2BG5E9Z4 385 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 SPAG7O75391 227 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 GPC5P78333 572 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 RTKN2Q8IZC4 609 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 RAD54LQ92698 747 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 SLC10A4Q96EP9 437 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 CALR3Q96L12 384 aaKnown RBP12.35□□□□□ -0.43
LAMA4-201ENST00000230538 TRIM55Q9BYV6 548 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 ZBTB5O15062 677 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 NR3C1P04150 777 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 FAM83BQ5T0W9 1011 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 SFR1Q86XK3 245 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 WDR75Q8IWA0 830 aaKnown RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 GIMAP8Q8ND71 665 aaPredicted RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 ABTB1Q969K4 478 aaPredicted RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 MMTAG2Q9BU76 263 aaKnown RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 SNX24Q9Y343 169 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 GPC3P51654 580 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 POLE2P56282 527 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 ELMSAN1Q6PJG2 1045 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 TTC13Q8NBP0 860 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 KIAA1586Q9HCI6 787 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 DONSONQ9NYP3 566 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 PPARGC1AQ9UBK2 798 aaKnown RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 CDC42BPGQ6DT37 1551 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 RNF219Q5W0B1 726 aaPredicted RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 HIPK4Q8NE63 616 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 ZC3H15Q8WU90 426 aaKnown RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 CAPN11Q9UMQ6 739 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 MIF4GDA9UHW6 222 aaKnown RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 NT5C2P49902 561 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 FSCBQ5H9T9 825 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 ST13P4Q8IZP2 240 aaPredicted RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 PROM2Q8N271 834 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 TMEM35BQ8NCS4 154 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 STRBPQ96SI9 672 aaKnown RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 POTEMA6NI47 508 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 RASA4BC9J798 803 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 GOLGA8MH3BSY2 632 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 RASA4O43374 803 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 MYCP01106 439 aaPredicted RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 LMNAP02545 664 aaKnown RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 MDM2Q00987 491 aaPredicted RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 STXBP2Q15833 593 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 ACAD11Q709F0 780 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 TBC1D1Q86TI0 1168 aaPredicted RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 TRIML2Q8N7C3 387 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 FAM167AQ96KS9 214 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 RMDN2Q96LZ7 410 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 CENPKQ9BS16 269 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 APOBEC2Q9Y235 224 aaKnown RBP12.34□□□□□ -0.43
LAMA4-201ENST00000230538 L3MBTL1Q9Y468 752 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 HEY1Q9Y5J3 304 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 ROBO2Q9HCK4 1378 aa12.34□□□□□ -0.43
LAMA4-201ENST00000230538 UBE4BO95155 1302 aa12.33□□□□□ -0.43
LAMA4-201ENST00000230538 ANKARQ7Z5J8 1434 aa12.33□□□□□ -0.43
LAMA4-201ENST00000230538 CTIFO43310 598 aaKnown RBP12.33□□□□□ -0.44
LAMA4-201ENST00000230538 ZRANB2O95218 330 aaKnown RBP eCLIP12.33□□□□□ -0.44
LAMA4-201ENST00000230538 ESRRBO95718 433 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 CALB1P05937 261 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 PYGBP11216 843 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 PFKFB3Q16875 520 aaPredicted RBP12.33□□□□□ -0.44
LAMA4-201ENST00000230538 KIAA1755Q5JYT7 1200 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 EPM2AIP1Q7L775 607 aaPredicted RBP12.33□□□□□ -0.44
LAMA4-201ENST00000230538 DHX40Q8IX18 779 aaKnown RBP12.33□□□□□ -0.44
LAMA4-201ENST00000230538 SCG3Q8WXD2 468 aaKnown RBP12.33□□□□□ -0.44
LAMA4-201ENST00000230538 TMEM60Q9H2L4 133 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 GTSE1Q9NYZ3 720 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 TSPOAP1O95153 1857 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 ABCB11O95342 1321 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 LRRC53A6NM62 1247 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 LGALS16A8MUM7 142 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 KPNA7A9QM74 516 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 PPP1R12AO14974 1030 aaPredicted RBP12.33□□□□□ -0.44
LAMA4-201ENST00000230538 NMT2O60551 498 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 CRKP46108 304 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 TMED1Q13445 227 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 TMEM259Q4ZIN3 620 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 TTLL11Q8NHH1 800 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 SLITRK6Q9H5Y7 841 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 FEM1BQ9UK73 627 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 ASNSP08243 561 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 GNAT1P11488 350 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 GGCXP38435 758 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 GCLMP48507 274 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 MAPK6Q16659 721 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 SZRD1Q7Z422 152 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 XXYLT1Q8NBI6 393 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 MCPH1Q8NEM0 835 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms