RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 GRB10Q13322 594 aa22.45■■□□□ 1.18
SNX3-201ENST00000230085 PTGISQ16647 500 aa22.45■■□□□ 1.18
SNX3-201ENST00000230085 ZC3H3Q8IXZ2 948 aaKnown RBP22.45■■□□□ 1.18
SNX3-201ENST00000230085 ATG4CQ96DT6 458 aa22.45■■□□□ 1.18
SNX3-201ENST00000230085 ZFYVE28Q9HCC9 887 aa22.45■■□□□ 1.18
SNX3-201ENST00000230085 PPP1R9AQ9ULJ8 1098 aa22.45■■□□□ 1.18
SNX3-201ENST00000230085 KLRF2D3W0D1 207 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 KIAA0754O94854 1291 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 GNA14O95837 355 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 NR1D1P20393 614 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 SLC7A5Q01650 507 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 CUL1Q13616 776 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 NAA35Q5VZE5 725 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 CHURC1Q8WUH1 139 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 CABS1Q96KC9 395 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 CALR3Q96L12 384 aaKnown RBP22.44■■□□□ 1.18
SNX3-201ENST00000230085 TSG101Q99816 390 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 BEGAINQ9BUH8 593 aa22.44■■□□□ 1.18
SNX3-201ENST00000230085 FAM207AQ9NSI2 230 aaPredicted RBP22.44■■□□□ 1.18
SNX3-201ENST00000230085 TLR2O60603 784 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 HEXIM1O94992 359 aaKnown RBP22.43■■□□□ 1.18
SNX3-201ENST00000230085 MDH1P40925 334 aaKnown RBP22.43■■□□□ 1.18
SNX3-201ENST00000230085 TNNC1P63316 161 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 PDCLQ13371 301 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 C6orf89Q6UWU4 347 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 HEATR3Q7Z4Q2 680 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 MMRN2Q9H8L6 949 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 AIPL1Q9NZN9 384 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 MYMKA6NI61 221 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 NKRFO15226 690 aaKnown RBP eCLIP22.43■■□□□ 1.18
SNX3-201ENST00000230085 PLA2G6O60733 806 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 FAM107AO95990 144 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 CARSP49589 748 aaKnown RBP22.43■■□□□ 1.18
SNX3-201ENST00000230085 KCNMA1Q12791 1236 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 ITGB3BPQ13352 177 aaPredicted RBP22.43■■□□□ 1.18
SNX3-201ENST00000230085 SLC18A3Q16572 532 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 TMEM119Q4V9L6 283 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 BTNL9Q6UXG8 535 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 FAM160B2Q86V87 743 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 TAX1BP1Q86VP1 789 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 OTUD6BQ8N6M0 293 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 LARP4BQ92615 738 aaKnown RBP22.43■■□□□ 1.18
SNX3-201ENST00000230085 CCDC43Q96MW1 224 aaKnown RBP22.43■■□□□ 1.18
SNX3-201ENST00000230085 ISCUQ9H1K1 167 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 TXNRD2Q9NNW7 524 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 CPA4Q9UI42 421 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 PRR12Q9ULL5 1215 aa22.43■■□□□ 1.18
SNX3-201ENST00000230085 SNAP25P60880 206 aa22.42■■□□□ 1.18
SNX3-201ENST00000230085 ANKRD13CQ8N6S4 541 aa22.42■■□□□ 1.18
SNX3-201ENST00000230085 ZBTB9Q96C00 473 aa22.42■■□□□ 1.18
SNX3-201ENST00000230085 RNPC3Q96LT9 517 aaKnown RBP22.42■■□□□ 1.18
SNX3-201ENST00000230085 PNMA5Q96PV4 448 aa22.42■■□□□ 1.18
SNX3-201ENST00000230085 RAB34Q9BZG1 259 aa22.42■■□□□ 1.18
SNX3-201ENST00000230085 RBPJLQ9UBG7 517 aa22.42■■□□□ 1.18
SNX3-201ENST00000230085 ADAMTS5Q9UNA0 930 aa22.42■■□□□ 1.18
SNX3-201ENST00000230085 MYH7BA7E2Y1 1941 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 VWA5AO00534 786 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 NOL4O94818 638 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 PAEPP09466 180 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 FKBP3Q00688 224 aaKnown RBP22.41■■□□□ 1.18
SNX3-201ENST00000230085 BIRC3Q13489 604 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 SFMBT2Q5VUG0 894 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 LBX2Q6XYB7 198 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 PLIN2Q99541 437 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 TMBIM4Q9HC24 238 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 SLC39A2Q9NP94 309 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 NFU1Q9UMS0 254 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 MYPNQ86TC9 1320 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 ADGRA2Q96PE1 1338 aa22.41■■□□□ 1.18
SNX3-201ENST00000230085 CCNT1O60563 726 aaKnown RBP22.4■■□□□ 1.18
SNX3-201ENST00000230085 SMTNP53814 917 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 GFPT1Q06210 699 aaPredicted RBP22.4■■□□□ 1.18
SNX3-201ENST00000230085 SPDYCQ5MJ68 293 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 SYDE2Q5VT97 1194 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 CACNA2D4Q7Z3S7 1137 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 ADGRF4Q8IZF3 695 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 USP38Q8NB14 1042 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 MYCBPAPQ8TBZ2 947 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 ZNF473Q8WTR7 871 aaKnown RBP22.4■■□□□ 1.18
SNX3-201ENST00000230085 CASKIN2Q8WXE0 1202 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 RAD54LQ92698 747 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 PBKQ96KB5 322 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 DRC1Q96MC2 740 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 CFHR5Q9BXR6 569 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 VAT1LQ9HCJ6 419 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 EPB41L5Q9HCM4 733 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 SAGE1Q9NXZ1 904 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 BTBD7Q9P203 1132 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 COL4A3BPQ9Y5P4 624 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 NCK2O43639 380 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 KRT14P02533 472 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 C17orf99Q6UX52 265 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 ACTRT1Q8TDG2 376 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 SCFD2Q8WU76 684 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 P3H4Q92791 437 aa22.4■■□□□ 1.18
SNX3-201ENST00000230085 ACTR5Q9H9F9 607 aaPredicted RBP22.4■■□□□ 1.18
SNX3-201ENST00000230085 COL11A1P12107 1806 aaPredicted RBP22.4■■□□□ 1.18
SNX3-201ENST00000230085 CNMDO75829 334 aa22.39■■□□□ 1.17
SNX3-201ENST00000230085 CXCR5P32302 372 aa22.39■■□□□ 1.17
SNX3-201ENST00000230085 GCLCP48506 637 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms