RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 DNERQ8NFT8 737 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 PPM1EQ8WY54 764 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 MMS19Q96T76 1030 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 PARVGQ9HBI0 331 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 H0YHG0 523 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 MFAP3LO75121 409 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 CCNE2O96020 404 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 GYPCP04921 128 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 NMT1P30419 496 aaKnown RBP12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 FAM71BQ8TC56 605 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 GPRC5CQ9NQ84 441 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 WRAP73Q9P2S5 460 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 ZNF18P17022 549 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 CCNE1P24864 410 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 SOX10P56693 466 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 CYP4F22Q6NT55 531 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 KIAA1328Q86T90 577 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 ZNF668Q96K58 619 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 SPATA33Q96N06 139 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 IWS1Q96ST2 819 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 LARSQ9P2J5 1176 aaKnown RBP12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 TRPC6Q9Y210 931 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 TELO2Q9Y4R8 837 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 SBF1O95248 1867 aa12.81□□□□□ -0.36
TNFAIP1-201ENST00000226225 PCNTO95613 3336 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 K7ENM7 598 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 ZEB2O60315 1214 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 ITGBL1O95965 494 aaPredicted RBP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 SFNP31947 248 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 GCLCP48506 637 aaPredicted RBP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 PEX3P56589 373 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 SPAG1Q07617 926 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 C2orf54Q08AI8 447 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 TSR1Q2NL82 804 aaKnown RBP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 ZC2HC1CQ53FD0 456 aaPredicted RBP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 XRRA1Q6P2D8 792 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 SAMD3Q8N6K7 520 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 KIAA0895Q8NCT3 520 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 COPS5Q92905 334 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 BICD1Q96G01 975 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 DHTKD1Q96HY7 919 aaPredicted RBP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 MS4A4AQ96JQ5 239 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 INPP4AQ96PE3 977 aaPredicted RBP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 NOC4LQ9BVI4 516 aaKnown RBP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 CENPHQ9H3R5 247 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 GINS2Q9Y248 185 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 MAFGO15525 162 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 ATP1A1P05023 1023 aaKnown RBP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 BCRP11274 1271 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 ATP1A2P50993 1020 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 POLGP54098 1239 aaPredicted RBP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 SLC7A5Q01650 507 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 UGCGQ16739 394 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 CCDC122Q5T0U0 273 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 KCTD16Q68DU8 428 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 HS2ST1Q7LGA3 356 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 CTAGE1Q96RT6 745 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 PTPN18Q99952 460 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 PDGFCQ9NRA1 345 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 PSD3Q9NYI0 1048 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 SMARCAL1Q9NZC9 954 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 HIP1RO75146 1068 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 FGFR1OPO95684 399 aaKnown RBP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 SLC12A3P55017 1021 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 TBC1D8BQ0IIM8 1120 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 SF3A3Q12874 501 aaKnown RBP eCLIP12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 GIT2Q14161 759 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 NEDD9Q14511 834 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 SAPCD2Q86UD0 394 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 TRIM50Q86XT4 487 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 METTL13Q8N6R0 699 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 SCLT1Q96NL6 688 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 GBP3Q9H0R5 595 aa12.8□□□□□ -0.36
TNFAIP1-201ENST00000226225 TNPO2O14787 897 aaKnown RBP12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 MYBL2P10244 700 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 CNGA1P29973 690 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 CYP2J2P51589 502 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 ADAM9Q13443 819 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 ENOX2Q16206 610 aaKnown RBP12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 ARSHQ5FYA8 562 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 DCAF17Q5H9S7 520 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 STXBP4Q6ZWJ1 553 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 BCAS4Q8TDM0 211 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 ZNF302Q9NR11 478 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 DKC1O60832 514 aaKnown RBP eCLIP12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 ZBTB48P10074 688 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 MYBP10242 640 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 COPB2P35606 906 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 SP2Q02086 613 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 FAM114A1Q8IWE2 563 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 DNAJC19Q96DA6 116 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 CNOT6LQ96LI5 555 aaKnown RBP12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 FGFBP2Q9BYJ0 223 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 RPTORQ8N122 1335 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 A0A1B0GTH6 734 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 DHX15O43143 795 aaKnown RBP12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 RGS20O76081 388 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 ERLIN2O94905 339 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms