RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 PUS10Q3MIT2 529 aaKnown RBP20.22■□□□□ 0.83
PFN1-201ENST00000225655 PAN2Q504Q3 1202 aaKnown RBP20.22■□□□□ 0.83
PFN1-201ENST00000225655 B3GNT9Q6UX72 402 aa20.22■□□□□ 0.83
PFN1-201ENST00000225655 FAM228AQ86W67 206 aa20.22■□□□□ 0.83
PFN1-201ENST00000225655 ETNPPLQ8TBG4 499 aa20.22■□□□□ 0.83
PFN1-201ENST00000225655 NAP1L4Q99733 375 aaKnown RBP20.22■□□□□ 0.83
PFN1-201ENST00000225655 FOXP1Q9H334 677 aaPredicted RBP20.22■□□□□ 0.83
PFN1-201ENST00000225655 GJB4Q9NTQ9 266 aa20.22■□□□□ 0.83
PFN1-201ENST00000225655 AKT3Q9Y243 479 aa20.22■□□□□ 0.83
PFN1-201ENST00000225655 NLRP11P59045 1033 aaKnown RBP20.21■□□□□ 0.83
PFN1-201ENST00000225655 MCTP1Q6DN14 999 aa20.21■□□□□ 0.83
PFN1-201ENST00000225655 PTCRAQ6ISU1 281 aaPredicted RBP20.21■□□□□ 0.83
PFN1-201ENST00000225655 MIER3Q7Z3K6 550 aa20.21■□□□□ 0.83
PFN1-201ENST00000225655 ADAMTS10Q9H324 1103 aa20.21■□□□□ 0.83
PFN1-201ENST00000225655 GRXCR2A6NFK2 248 aa20.2■□□□□ 0.82
PFN1-201ENST00000225655 GATMP50440 423 aa20.2■□□□□ 0.82
PFN1-201ENST00000225655 FAM189BP81408 668 aa20.2■□□□□ 0.82
PFN1-201ENST00000225655 CAMK1Q14012 370 aa20.2■□□□□ 0.82
PFN1-201ENST00000225655 DSC3Q14574 896 aa20.2■□□□□ 0.82
PFN1-201ENST00000225655 TARBP2Q15633 366 aaKnown RBP20.2■□□□□ 0.82
PFN1-201ENST00000225655 INF2Q27J81 1249 aa20.2■□□□□ 0.82
PFN1-201ENST00000225655 PIK3AP1Q6ZUJ8 805 aa20.2■□□□□ 0.82
PFN1-201ENST00000225655 LRRC71Q8N4P6 559 aa20.2■□□□□ 0.82
PFN1-201ENST00000225655 C1QTNF1Q9BXJ1 281 aa20.2■□□□□ 0.82
PFN1-201ENST00000225655 NIFKQ9BYG3 293 aaKnown RBP20.2■□□□□ 0.82
PFN1-201ENST00000225655 ALG13Q9NP73 1137 aaKnown RBP20.2■□□□□ 0.82
PFN1-201ENST00000225655 DDX25Q9UHL0 483 aaKnown RBP20.2■□□□□ 0.82
PFN1-201ENST00000225655 VPS37CA5D8V6 355 aaPredicted RBP20.19■□□□□ 0.82
PFN1-201ENST00000225655 BTBD18B2RXH4 712 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 H3BQ06 376 aaPredicted RBP20.19■□□□□ 0.82
PFN1-201ENST00000225655 ITGB1P05556 798 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 EIF4BP23588 611 aaKnown RBP20.19■□□□□ 0.82
PFN1-201ENST00000225655 TBC1D8BQ0IIM8 1120 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 HYAL1Q12794 435 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 CTC1Q2NKJ3 1217 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 XKR3Q5GH77 459 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 FAM178BQ8IXR5 827 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 KLHL23Q8NBE8 558 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 SPRYD3Q8NCJ5 442 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 SPPL3Q8TCT6 385 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 ELAC1Q9H777 363 aaKnown RBP20.19■□□□□ 0.82
PFN1-201ENST00000225655 TMEM161AQ9NX61 479 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 CLDND1Q9NY35 253 aa20.19■□□□□ 0.82
PFN1-201ENST00000225655 NOL7Q9UMY1 257 aaKnown RBP20.19■□□□□ 0.82
PFN1-201ENST00000225655 SLC37A4O43826 429 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 STBD1O95210 358 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 IL9P15248 144 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 IBSPP21815 317 aaPredicted RBP20.18■□□□□ 0.82
PFN1-201ENST00000225655 DNAJB1P25685 340 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 GPC3P51654 580 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 LETM2Q2VYF4 491 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 FAM102BQ5T8I3 360 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 PPP4R3AQ6IN85 833 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 EP400NLQ6ZTU2 488 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 NEK8Q86SG6 692 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 NOSTRINQ8IVI9 506 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 OXER1Q8TDS5 423 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 ATP6V0A4Q9HBG4 840 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 PLXNA4Q9HCM2 1894 aa20.18■□□□□ 0.82
PFN1-201ENST00000225655 TBKBP1A7MCY6 615 aa20.17■□□□□ 0.82
PFN1-201ENST00000225655 DARSP14868 501 aaKnown RBP20.17■□□□□ 0.82
PFN1-201ENST00000225655 GCFC2P16383 781 aaKnown RBP20.17■□□□□ 0.82
PFN1-201ENST00000225655 LTBRP36941 435 aa20.17■□□□□ 0.82
PFN1-201ENST00000225655 NR5A1Q13285 461 aa20.17■□□□□ 0.82
PFN1-201ENST00000225655 FAM20AQ96MK3 541 aa20.17■□□□□ 0.82
PFN1-201ENST00000225655 CEP89Q96ST8 783 aa20.17■□□□□ 0.82
PFN1-201ENST00000225655 CD320Q9NPF0 282 aa20.17■□□□□ 0.82
PFN1-201ENST00000225655 AAASQ9NRG9 546 aa20.17■□□□□ 0.82
PFN1-201ENST00000225655 SEPT9Q9UHD8 586 aaPredicted RBP20.17■□□□□ 0.82
PFN1-201ENST00000225655 FAM50BQ9Y247 325 aa20.17■□□□□ 0.82
PFN1-201ENST00000225655 PCDHB12Q9Y5F1 795 aa20.17■□□□□ 0.82
PFN1-201ENST00000225655 IGKV6-21A0A0C4DH24 114 aa20.16■□□□□ 0.82
PFN1-201ENST00000225655 STX6O43752 255 aa20.16■□□□□ 0.82
PFN1-201ENST00000225655 SYT1P21579 422 aa20.16■□□□□ 0.82
PFN1-201ENST00000225655 PSMC5P62195 406 aa20.16■□□□□ 0.82
PFN1-201ENST00000225655 CDC42EP1Q00587 391 aa20.16■□□□□ 0.82
PFN1-201ENST00000225655 POF1BQ8WVV4 589 aa20.16■□□□□ 0.82
PFN1-201ENST00000225655 PPP2R3CQ969Q6 453 aa20.16■□□□□ 0.82
PFN1-201ENST00000225655 EPHX3Q9H6B9 360 aa20.16■□□□□ 0.82
PFN1-201ENST00000225655 KCNMB3Q9NPA1 279 aa20.16■□□□□ 0.82
PFN1-201ENST00000225655 FGFR1P11362 822 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 ZSCAN20P17040 1043 aaPredicted RBP20.15■□□□□ 0.82
PFN1-201ENST00000225655 COL9A1P20849 921 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 U2AF2P26368 475 aaKnown RBP eCLIP20.15■□□□□ 0.822e-9■□□□□ 9.6
PFN1-201ENST00000225655 UBE3AQ05086 875 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 PPP2R5CQ13362 524 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 DRP2Q13474 957 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 MTERF2Q49AM1 385 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 GJD3Q8N144 294 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 NLRP7Q8WX94 980 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 TNFRSF25Q93038 417 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 SCLT1Q96NL6 688 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 VAV3Q9UKW4 847 aa20.15■□□□□ 0.82
PFN1-201ENST00000225655 TMEM150BA6NC51 233 aa20.14■□□□□ 0.81
PFN1-201ENST00000225655 TBX3O15119 743 aa20.14■□□□□ 0.81
PFN1-201ENST00000225655 HOXA2O43364 376 aa20.14■□□□□ 0.81
PFN1-201ENST00000225655 CSPG5O95196 566 aa20.14■□□□□ 0.81
PFN1-201ENST00000225655 GTF2F1P35269 517 aaKnown RBP eCLIP20.14■□□□□ 0.818e-11■■■□□ 18.2
PFN1-201ENST00000225655 TRAPPC10P48553 1259 aa20.14■□□□□ 0.81
PFN1-201ENST00000225655 DNM2P50570 870 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms