RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 STK38LQ9Y2H1 464 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 ENTPD3O75355 529 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 CASP2P42575 452 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 STOX1Q6ZVD7 989 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 VSTM4Q8IW00 320 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 SPDYE1Q8NFV5 336 aaPredicted RBP19.82■□□□□ 0.76
CLIP2-201ENST00000223398 FAM151AQ8WW52 585 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 C19orf81C9J6K1 198 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 MOCS2O96007 188 aaPredicted RBP19.82■□□□□ 0.76
CLIP2-201ENST00000223398 TTC19Q6DKK2 380 aaPredicted RBP19.82■□□□□ 0.76
CLIP2-201ENST00000223398 ARHGAP24Q8N264 748 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 TTC1Q99614 292 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 WDR19Q8NEZ3 1342 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 NPHP3-ACAD11A0A0J9YXS1 232 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 ZNF543Q08ER8 600 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 KNOP1Q1ED39 458 aaKnown RBP19.82■□□□□ 0.76
CLIP2-201ENST00000223398 HHIPL2Q6UWX4 724 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 RUNDC3BQ96NL0 473 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 C11orf70Q9BRQ4 267 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 GOLPH3LQ9H4A5 285 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 TXNDC9O14530 226 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 KLRK1P26718 216 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 YWHABP31946 246 aaKnown RBP19.81■□□□□ 0.76
CLIP2-201ENST00000223398 INPP5BP32019 993 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 VAMP7P51809 220 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 NAA25Q14CX7 972 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 BBS9Q3SYG4 887 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 FAM71BQ8TC56 605 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 CDC23Q9UJX2 597 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 ANAPC7Q9UJX3 599 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 GPC4O75487 556 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 NDUFA10O95299 355 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 RECQLP46063 649 aaPredicted RBP19.81■□□□□ 0.76
CLIP2-201ENST00000223398 IFNAR2P48551 515 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 TMEM143Q96AN5 459 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 LAMC1P11047 1609 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 CACNB2Q08289 660 aaPredicted RBP19.81■□□□□ 0.76
CLIP2-201ENST00000223398 KCNH2Q12809 1159 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 RAB44Q7Z6P3 723 aaPredicted RBP19.81■□□□□ 0.76
CLIP2-201ENST00000223398 KLHL14Q9P2G3 628 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 CNOT8Q9UFF9 292 aaKnown RBP19.81■□□□□ 0.76
CLIP2-201ENST00000223398 UBE2Q2LH0YL09 131 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 CREB3O43889 395 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 CSF1RP07333 972 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 CDC25BP30305 580 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 KRT33BQ14525 404 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 TMEM35BQ8NCS4 154 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 RBAKQ9NYW8 714 aaPredicted RBP19.81■□□□□ 0.76
CLIP2-201ENST00000223398 A8MXQ7 604 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 KIF28PB7ZC32 967 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 PPFIA4O75335 1185 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 PMLP29590 882 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 SOX5P35711 763 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 TMED2Q15363 201 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 TBK1Q9UHD2 729 aa19.81■□□□□ 0.76
CLIP2-201ENST00000223398 PNPLA6Q8IY17 1366 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 UBE4BO95155 1302 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 CNTNAP4Q9C0A0 1308 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 F5H423 210 aaPredicted RBP19.8■□□□□ 0.76
CLIP2-201ENST00000223398 GBP1P32455 592 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 USP11P51784 963 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 MAP7Q14244 749 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 LPAR1Q92633 364 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 SUCLA2Q9P2R7 463 aaPredicted RBP19.8■□□□□ 0.76
CLIP2-201ENST00000223398 SCINQ9Y6U3 715 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 ABCA9Q8IUA7 1624 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 TRIM49P0CI25 452 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 TRIM49CP0CI26 452 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 HEMGNQ9BXL5 484 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 SUDS3Q9H7L9 328 aaPredicted RBP19.8■□□□□ 0.76
CLIP2-201ENST00000223398 PRR12Q9ULL5 1215 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 TTC31Q49AM3 519 aaPredicted RBP19.8■□□□□ 0.76
CLIP2-201ENST00000223398 CACNA2D3Q8IZS8 1091 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 ZKSCAN4Q969J2 545 aaPredicted RBP19.8■□□□□ 0.76
CLIP2-201ENST00000223398 MSH2P43246 934 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 BCL2L12Q9HB09 334 aa19.8■□□□□ 0.76
CLIP2-201ENST00000223398 PTPRMP28827 1452 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 CD163L1Q9NR16 1453 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 PCK1P35558 622 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 SLCO1A2P46721 670 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 ZNF746Q6NUN9 644 aaPredicted RBP19.79■□□□□ 0.76
CLIP2-201ENST00000223398 LRRC8CQ8TDW0 803 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 TTC25Q96NG3 672 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 A6NNZ2 444 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 RCAN1P53805 252 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 TUBB8Q3ZCM7 444 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 FAM114A2Q9NRY5 505 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 PCSK1NQ9UHG2 260 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 AGO2Q9UKV8 859 aaKnown RBP19.79■□□□□ 0.76
CLIP2-201ENST00000223398 HEY1Q9Y5J3 304 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 NEMP1O14524 444 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 NME3Q13232 169 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 SLC10A5Q5PT55 438 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 C9orf131Q5VYM1 1079 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 HAUS6Q7Z4H7 955 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 EPHA7Q15375 998 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 PPP1R12CQ9BZL4 782 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 TLK1Q9UKI8 766 aa19.79■□□□□ 0.76
CLIP2-201ENST00000223398 NMT1P30419 496 aaKnown RBP19.78■□□□□ 0.76
CLIP2-201ENST00000223398 ASPHQ12797 758 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms