RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 PRLRP16471 622 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 CDC42EP1Q00587 391 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 OCA2Q04671 838 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 FAM47AQ5JRC9 791 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 ITPRIPL1Q6GPH6 555 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 DARS2Q6PI48 645 aaKnown RBP4.71□□□□□ -1.65
CHD9-201ENST00000219084 RNF207Q6ZRF8 634 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 RAPH1Q70E73 1250 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 MB21D2Q8IYB1 491 aaPredicted RBP4.71□□□□□ -1.65
CHD9-201ENST00000219084 GLG1Q92896 1179 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 ACSBG1Q96GR2 724 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 UBE2TQ9NPD8 197 aaPredicted RBP4.71□□□□□ -1.65
CHD9-201ENST00000219084 SAMSN1Q9NSI8 373 aaKnown RBP4.71□□□□□ -1.65
CHD9-201ENST00000219084 E7ENQ6 273 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 CES2O00748 559 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 COPEO14579 308 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ESRRBO95718 433 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 NR3C1P04150 777 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 WDR93Q6P2C0 686 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 TMEM179Q6ZVK1 233 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 NLRP10Q86W26 655 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ZNF677Q86XU0 584 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 TGS1Q96RS0 853 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 C7orf25Q9BPX7 421 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 MED10Q9BTT4 135 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 GOLPH3LQ9H4A5 285 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 NDUFA13Q9P0J0 144 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 SEPT3Q9UH03 358 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 POC1B-GALNT4F8VUJ3 575 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 H7C1W4 665 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ENC1O14682 589 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ADRA2BP18089 450 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 HNRNPH2P55795 449 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 MRPS35P82673 323 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 PTPN12Q05209 780 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 ADRM1Q16186 407 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 KNOP1Q1ED39 458 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 FAM47CQ5HY64 1035 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 HDAC11Q96DB2 347 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ZBTB18Q99592 522 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 SNX25Q9H3E2 840 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ANKFY1Q9P2R3 1169 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 SNX12Q9UMY4 172 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ROBO2Q9HCK4 1378 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 PDXKO00764 312 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 TNPO2O14787 897 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 APOA4P06727 396 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 BCAMP50895 628 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 KPNB1Q14974 876 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 ZNF827Q17R98 1081 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 USPL1Q5W0Q7 1092 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 SRLQ86TD4 932 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 METTL23Q86XA0 190 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 LZICQ8WZA0 190 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 KRT35Q92764 455 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 GJA10Q969M2 543 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 THOC1Q96FV9 657 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 TBX3O15119 743 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 GSTA4O15217 222 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 RTN2O75298 545 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 TMCC1O94876 653 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 APOEP02649 317 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 BMP3P12645 472 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 MUTP22033 750 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 EEF1DP29692 281 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 PAPOLAP51003 745 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 KRR1Q13601 381 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 THOC5Q13769 683 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 ZC3H18Q86VM9 953 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 FOXP4Q8IVH2 680 aaPredicted RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 NDUFAF2Q8N183 169 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 FBXL16Q8N461 479 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 SDR42E1Q8WUS8 393 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 WWP1Q9H0M0 922 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 C2orf40Q9H1Z8 148 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 MLXIPQ9HAP2 919 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ATP6V0A4Q9HBG4 840 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 STK32BQ9NY57 414 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ZSWIM5Q9P217 1185 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 ZNF609O15014 1411 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 CDH16O75309 829 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ZBED1O96006 694 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 A1BGP04217 495 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 PHKA1P46020 1223 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 NOP14P78316 857 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 KCNV1Q6PIU1 500 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 PRUNE1Q86TP1 453 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 SESTD1Q86VW0 696 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 EFHBQ8N7U6 833 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 XXYLT1Q8NBI6 393 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 STRBPQ96SI9 672 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 GREM2Q9H772 168 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 SUN2Q9UH99 717 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 FEM1BQ9UK73 627 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ITGB1BP2Q9UKP3 347 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 NOVA2Q9UNW9 492 aaKnown RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 RICTORQ6R327 1708 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ZRANB2O95218 330 aaKnown RBP eCLIP4.71□□□□□ -1.66
CHD9-201ENST00000219084 SOX5P35711 763 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms