RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 ENTPD3O75355 529 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 FGGP02679 453 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 TMEM179Q6ZVK1 233 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 ETNPPLQ8TBG4 499 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 ARHGEF26Q96DR7 871 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 SH2D3AQ9BRG2 576 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 NUCKS1Q9H1E3 243 aaKnown RBP17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 ATRNL1Q5VV63 1379 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 KDM3AQ9Y4C1 1321 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 ZBTB7AO95365 584 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 HSPA9P38646 679 aaKnown RBP17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 CYP2J2P51589 502 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 MNAT1P51948 309 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 MARSP56192 900 aaKnown RBP17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 HYIQ5T013 277 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 DCAF12L1Q5VU92 463 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 CPNE8Q86YQ8 564 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 MKL1Q969V6 931 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 LENG9Q96B70 501 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 TMOD4Q9NZQ9 345 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 DNM3Q9UQ16 869 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 ATP8A1Q9Y2Q0 1164 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 TISP43B9A030 160 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 EVI5O60447 810 aa17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 BUB1BO60566 1050 aaPredicted RBP17.23■□□□□ 0.35
SNAPC1-201ENST00000216294 GCOM1H8Y6P7 765 aaPredicted RBP17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 PGRMC1O00264 195 aaKnown RBP17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 MSH4O15457 936 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 GNA14O95837 355 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 CPP00450 1065 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 VIL1P09327 827 aaKnown RBP17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 MYZAPP0CAP1 466 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 DHX9Q08211 1270 aaKnown RBP17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 MMS22LQ6ZRQ5 1243 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 CDAN1Q8IWY9 1227 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 WHAMMQ8TF30 809 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 GMLQ99445 158 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 RNF14Q9UBS8 474 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 TMEM110-MUSTN1A8MSY1 372 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 PHF20L1A8MW92 1017 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 MEFVO15553 781 aaPredicted RBP17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 TGFB1I1O43294 461 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 KIAA0754O94854 1291 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 SHBGP04278 402 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 FNTAP49354 379 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 MAGOHP61326 146 aaKnown RBP17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 CBWD6Q4V339 395 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 CBWD3Q5JTY5 395 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 CBWD5Q5RIA9 395 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 TPH2Q8IWU9 490 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 BANK1Q8NDB2 785 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 SLC35G2Q8TBE7 412 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 MAGOHBQ96A72 148 aaKnown RBP17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.22■□□□□ 0.353e-8■■■□□ 15.9
SNAPC1-201ENST00000216294 CD248Q9HCU0 757 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 ACP6Q9NPH0 428 aa17.22■□□□□ 0.35
SNAPC1-201ENST00000216294 FRMD3A2A2Y4 597 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 F5H6K3 240 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 H2AFZP0C0S5 128 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 KLRC3Q07444 240 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 DLGAP5Q15398 846 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 PPP1R18Q6NYC8 613 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 H2AFVQ71UI9 128 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 NT5DC3Q86UY8 548 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 OLIG1Q8TAK6 271 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 IPO4Q8TEX9 1081 aaKnown RBP17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 DCAF4Q8WV16 495 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 RUBCNQ92622 972 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 GOPCQ9HD26 462 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 TMOD2Q9NZR1 351 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 NDUFB10O96000 172 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 RBM26Q5T8P6 1007 aaKnown RBP17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 MREGQ8N565 214 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 MYCT1Q8N699 235 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 VEZTQ9HBM0 779 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 PKD2L1Q9P0L9 805 aa17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 ZNF70Q9UC06 446 aaPredicted RBP17.21■□□□□ 0.35
SNAPC1-201ENST00000216294 ATAD5Q96QE3 1844 aa17.21■□□□□ 0.34
SNAPC1-201ENST00000216294 A0A1W2PRG0 241 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 TLDC2A0PJX2 215 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 GOLGA6L10A6NI86 522 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 MARCKSL1P49006 195 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 EDRF1Q3B7T1 1238 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 ZNF746Q6NUN9 644 aaPredicted RBP17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 EPM2AIP1Q7L775 607 aaPredicted RBP17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 SYT2Q8N9I0 419 aaPredicted RBP17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 ZSWIM2Q8NEG5 633 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 CYFIP2Q96F07 1278 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 PLCB1Q9NQ66 1216 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 KRT71Q3SY84 523 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 FRMD5Q7Z6J6 570 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 OGFOD1Q8N543 542 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 THAP2Q9H0W7 228 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 COG5Q9UP83 839 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 TRAF3IP3Q9Y228 551 aa17.2■□□□□ 0.34
SNAPC1-201ENST00000216294 OPLAHO14841 1288 aa17.19■□□□□ 0.34
SNAPC1-201ENST00000216294 GCFC2P16383 781 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms