RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 IKZF4Q9H2S9 585 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 DNM3Q9UQ16 869 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 MYO3BQ8WXR4 1341 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 TXNDC9O14530 226 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 GCNT3O95395 438 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 ACTN1P12814 892 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 STX2P32856 288 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 SNX1Q13596 522 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 CCNI2Q6ZMN8 369 aaPredicted RBP16.22■□□□□ 0.19
SRRD-201ENST00000215917 HOOK3Q86VS8 718 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 MDM1Q8TC05 714 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 RNPC3Q96LT9 517 aaKnown RBP16.22■□□□□ 0.19
SRRD-201ENST00000215917 OSBPL9Q96SU4 736 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 NT5C3AQ9H0P0 336 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 RASAL2Q9UJF2 1139 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 PPP1R2P41236 205 aa16.21■□□□□ 0.19
SRRD-201ENST00000215917 ZNF211Q13398 564 aaPredicted RBP16.21■□□□□ 0.19
SRRD-201ENST00000215917 SFR1Q86XK3 245 aa16.21■□□□□ 0.19
SRRD-201ENST00000215917 RTKN2Q8IZC4 609 aa16.21■□□□□ 0.19
SRRD-201ENST00000215917 KIF2BQ8N4N8 673 aa16.21■□□□□ 0.19
SRRD-201ENST00000215917 RETREG2Q8NC44 543 aa16.21■□□□□ 0.19
SRRD-201ENST00000215917 ZIM3Q96PE6 472 aa16.21■□□□□ 0.19
SRRD-201ENST00000215917 MRIQ9BWK5 157 aa16.21■□□□□ 0.19
SRRD-201ENST00000215917 RBM12Q9NTZ6 932 aaKnown RBP16.21■□□□□ 0.19
SRRD-201ENST00000215917 FBXO28Q9NVF7 368 aa16.21■□□□□ 0.19
SRRD-201ENST00000215917 MEFVO15553 781 aaPredicted RBP16.21■□□□□ 0.18
SRRD-201ENST00000215917 HIP1RO75146 1068 aa16.21■□□□□ 0.18
SRRD-201ENST00000215917 KCNA3P22001 575 aa16.21■□□□□ 0.18
SRRD-201ENST00000215917 CASP5P51878 434 aa16.21■□□□□ 0.18
SRRD-201ENST00000215917 USTQ9Y2C2 406 aa16.21■□□□□ 0.18
SRRD-201ENST00000215917 EIF3HO15372 352 aaKnown RBP eCLIP16.2■□□□□ 0.18
SRRD-201ENST00000215917 LRRN2O75325 713 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 ENTPD3O75355 529 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 LRRC63Q05C16 580 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 PPP4R3AQ6IN85 833 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 RFX8Q6ZV50 586 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 ERMNQ8TAM6 284 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 MKL1Q969V6 931 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 ERGIC2Q96RQ1 377 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 SNX24Q9Y343 169 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 PDE2AO00408 941 aaPredicted RBP16.2■□□□□ 0.18
SRRD-201ENST00000215917 ZBTB39O15060 712 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 CETN3O15182 167 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 EGFRP00533 1210 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 KRT15P19012 456 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 TNFAIP3P21580 790 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 DGKZQ13574 1117 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 CATSPER3Q86XQ3 398 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 DNAJC19Q96DA6 116 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 SH2D3AQ9BRG2 576 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 HOMER2Q9NSB8 354 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 PRR12Q9ULL5 1215 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 WDR91A4D1P6 747 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 MEIS2O14770 477 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 CLK2P49760 499 aaKnown RBP16.2■□□□□ 0.18
SRRD-201ENST00000215917 SP4Q02446 784 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 CXCL9Q07325 125 aa16.2■□□□□ 0.18
SRRD-201ENST00000215917 ACSL3O95573 720 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 CYP11B2P19099 503 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 FKBP1AP62942 108 aaKnown RBP16.19■□□□□ 0.18
SRRD-201ENST00000215917 HP1BP3Q5SSJ5 553 aaPredicted RBP16.19■□□□□ 0.18
SRRD-201ENST00000215917 TTYH3Q9C0H2 523 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 FAM86B1E9PN63 330 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 FAM86B2P0C5J1 330 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 GCFC2P16383 781 aaKnown RBP16.19■□□□□ 0.18
SRRD-201ENST00000215917 LSP1P33241 339 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 COPB2P35606 906 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 MUM1Q2TAK8 710 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 TMCO4Q5TGY1 634 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 HAUS3Q68CZ6 603 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 LRRC55Q6ZSA7 311 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 LMBR1Q8WVP7 490 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 HVCN1Q96D96 273 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 SPATS2LQ9NUQ6 558 aaKnown RBP16.19■□□□□ 0.18
SRRD-201ENST00000215917 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 NUGGCQ68CJ6 796 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 CYP4F22Q6NT55 531 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 TRAPPC11Q7Z392 1133 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 CPXCR1Q8N123 301 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 FAM114A2Q9NRY5 505 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 AMACRQ9UHK6 382 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 PLAGL2Q9UPG8 496 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 SIK3Q9Y2K2 1263 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 GJA3Q9Y6H8 435 aa16.19■□□□□ 0.18
SRRD-201ENST00000215917 BAG2O95816 211 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 MYBL2P10244 700 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 ELF1P32519 619 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 ARHGEF10LQ9HCE6 1279 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 PPP1R37O75864 691 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 MYBP10242 640 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 AMPD2Q01433 879 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 KCNA1Q09470 495 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 TAF11Q15544 211 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 MEA1Q16626 185 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 TMEM119Q4V9L6 283 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 NAIF1Q69YI7 327 aaPredicted RBP16.18■□□□□ 0.18
SRRD-201ENST00000215917 PPP1R18Q6NYC8 613 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 PPP1R14CQ8TAE6 165 aa16.18■□□□□ 0.18
SRRD-201ENST00000215917 ZNF473Q8WTR7 871 aaKnown RBP16.18■□□□□ 0.18
SRRD-201ENST00000215917 SCFD1Q8WVM8 642 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms