RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TFDP1Q14186 410 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 KPNB1Q14974 876 aaKnown RBP11.15□□□□□ -0.62
VCL-201ENST00000211998 LRRC24Q50LG9 513 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 DEPDC1BQ8WUY9 529 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 MED10Q9BTT4 135 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 AMNQ9BXJ7 453 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 SYNGAP1Q96PV0 1343 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 ZBTB24O43167 697 aaPredicted RBP11.15□□□□□ -0.62
VCL-201ENST00000211998 ENO1P06733 434 aaKnown RBP11.15□□□□□ -0.62
VCL-201ENST00000211998 SERPINB10P48595 397 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 SULF1Q8IWU6 871 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 MYCBPAPQ8TBZ2 947 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 NAF1Q96HR8 494 aaKnown RBP11.15□□□□□ -0.62
VCL-201ENST00000211998 SLITRK6Q9H5Y7 841 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 MCM8Q9UJA3 840 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 PPEF1O14829 653 aaPredicted RBP11.15□□□□□ -0.63
VCL-201ENST00000211998 HOXA7P31268 230 aaPredicted RBP11.15□□□□□ -0.63
VCL-201ENST00000211998 CRKLP46109 303 aaKnown RBP11.15□□□□□ -0.63
VCL-201ENST00000211998 DMPKQ09013 629 aa11.15□□□□□ -0.63
VCL-201ENST00000211998 USPL1Q5W0Q7 1092 aa11.15□□□□□ -0.63
VCL-201ENST00000211998 SPOPLQ6IQ16 392 aa11.15□□□□□ -0.63
VCL-201ENST00000211998 DDHD1Q8NEL9 900 aa11.15□□□□□ -0.63
VCL-201ENST00000211998 TRIM11Q96F44 468 aa11.15□□□□□ -0.63
VCL-201ENST00000211998 BTBD6Q96KE9 485 aa11.15□□□□□ -0.63
VCL-201ENST00000211998 AIFM3Q96NN9 605 aa11.15□□□□□ -0.63
VCL-201ENST00000211998 STK17AQ9UEE5 414 aa11.15□□□□□ -0.63
VCL-201ENST00000211998 TLK1Q9UKI8 766 aa11.15□□□□□ -0.63
VCL-201ENST00000211998 NOC2LQ9Y3T9 749 aaKnown RBP11.15□□□□□ -0.63
VCL-201ENST00000211998 TRIM49BA6NDI0 452 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 E9PMD0 336 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 ATP6V1G2O95670 118 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 FGFR4P22455 802 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 ABCD1P33897 745 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 ZMYM1Q5SVZ6 1142 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 RNF26Q9BY78 433 aaPredicted RBP11.14□□□□□ -0.63
VCL-201ENST00000211998 ADA2Q9NZK5 511 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 RGL1Q9NZL6 768 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 CCPG1Q9ULG6 757 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 CDHR2Q9BYE9 1310 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 TMEM191BP0C7N4 346 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 ZCCHC18P0CG32 403 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 LTKP29376 864 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 CASP1P29466 404 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 PSMC2P35998 433 aaKnown RBP11.14□□□□□ -0.63
VCL-201ENST00000211998 NT5C2P49902 561 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 BPIFB4P59827 614 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 ZBTB41Q5SVQ8 909 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 GADL1Q6ZQY3 521 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 MFN1Q8IWA4 741 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 AK8Q96MA6 479 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 FAM96AQ9H5X1 160 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 AMACRQ9UHK6 382 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 FAM187AA6NFU0 413 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 XPOTO43592 962 aaKnown RBP11.14□□□□□ -0.63
VCL-201ENST00000211998 DLATP10515 647 aaKnown RBP11.14□□□□□ -0.63
VCL-201ENST00000211998 SCNN1DP51172 638 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 OCRLQ01968 901 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 CAV1Q03135 178 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 TRIM16LQ309B1 348 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 KDM7AQ6ZMT4 941 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 DACH2Q96NX9 599 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 GREM2Q9H772 168 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 NLRP1Q9C000 1473 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 MYO5CQ9NQX4 1742 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 CCNA1P78396 465 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 ZNF211Q13398 564 aaPredicted RBP11.14□□□□□ -0.63
VCL-201ENST00000211998 MDH1BQ5I0G3 518 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 TRAF7Q6Q0C0 670 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 RASGRP2Q7LDG7 609 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 FAM186BQ8IYM0 893 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 OPTNQ96CV9 577 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 MS4A14Q96JA4 679 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 CCT7Q99832 543 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 MOV10L1Q9BXT6 1211 aaKnown RBP11.14□□□□□ -0.63
VCL-201ENST00000211998 SNX25Q9H3E2 840 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 MRPL40Q9NQ50 206 aaKnown RBP11.14□□□□□ -0.63
VCL-201ENST00000211998 PCDHA1Q9Y5I3 950 aa11.14□□□□□ -0.63
VCL-201ENST00000211998 PLEKHG2Q9H7P9 1386 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 CAPN9O14815 690 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 PFDN6O15212 129 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 ATP6V1B1P15313 513 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 GAP43P17677 238 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 POLGP54098 1239 aaPredicted RBP11.13□□□□□ -0.63
VCL-201ENST00000211998 SLC12A1Q13621 1099 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 TRIP10Q15642 601 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 DOK7Q18PE1 504 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 DARS2Q6PI48 645 aaKnown RBP11.13□□□□□ -0.63
VCL-201ENST00000211998 EXOC8Q8IYI6 725 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 FBXL13Q8NEE6 735 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.13□□□□□ -0.631e-10■■■■■ 87.1
VCL-201ENST00000211998 KIAA1024Q9UPX6 916 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 NBPF26B4DH59 902 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 XPO1O14980 1071 aaKnown RBP11.13□□□□□ -0.63
VCL-201ENST00000211998 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 SERPINB1P30740 379 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 FAM47CQ5HY64 1035 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 FOXR1Q6PIV2 292 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 BTNL9Q6UXG8 535 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 ADCK1Q86TW2 530 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms