RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 DOCK2Q92608 1830 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 NQO1P15559 274 aaKnown RBP21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 BTDP43251 543 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 MARCKSL1P49006 195 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 VPS41P49754 854 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 ZNF746Q6NUN9 644 aaPredicted RBP21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 SLC30A10Q6XR72 485 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 SEPT14Q6ZU15 432 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 ALG3Q92685 438 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 LBHD1Q9BQE6 289 aaPredicted RBP21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 ZNF287Q9HBT7 754 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 RASAL2Q9UJF2 1139 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 COL4A1P02462 1669 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 MPHOSPH10O00566 681 aaKnown RBP21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 TNFAIP3P21580 790 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 TNIP1Q15025 636 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 LNX1Q8TBB1 728 aaPredicted RBP21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 ADAM7Q9H2U9 754 aa21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 MTRF1LQ9UGC7 380 aaKnown RBP21.72■■□□□ 1.07
PPP1R3F-201ENST00000055335 MED24O75448 989 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 PALB2Q86YC2 1186 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 NT5C3AQ9H0P0 336 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 NUP98P52948 1817 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 KRT16P08779 473 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 MMP13P45452 471 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 RPL21P46778 160 aaKnown RBP21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 SATB1Q01826 763 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 MESDQ14696 234 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 BZW1Q7L1Q6 419 aaKnown RBP21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 EIF1ADQ8N9N8 165 aaKnown RBP21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 ZNF622Q969S3 477 aaKnown RBP eCLIP21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 HOOK2Q96ED9 719 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 BCL9O00512 1426 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 CACNA1SQ13698 1873 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 DRAP1Q14919 205 aaPredicted RBP21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 TRIP13Q15645 432 aaPredicted RBP21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 KRT35Q92764 455 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 HES6Q96HZ4 224 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 POP1Q99575 1024 aaKnown RBP21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 EPB41L4BQ9H329 900 aa21.71■■□□□ 1.07
PPP1R3F-201ENST00000055335 CES2O00748 559 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 PTENP60484 403 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 SNX1Q13596 522 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 KNOP1Q1ED39 458 aaKnown RBP21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 PRR16Q569H4 304 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 FAM47EQ6ZV65 393 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 NBPF5PQ86XG9 351 aaPredicted RBP21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 PSTPIP2Q9H939 334 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 CTNNAL1Q9UBT7 734 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 SLC12A4Q9UP95 1085 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 NR3C1P04150 777 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 TRIM49P0CI25 452 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 TRIM49CP0CI26 452 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 DUPD1Q68J44 220 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 DDX23Q9BUQ8 820 aaKnown RBP21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 SLURP2P0DP57 97 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 CYP2J2P51589 502 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 NCALDP61601 193 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 C6orf118Q5T5N4 469 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 PIGWQ7Z7B1 504 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 RASGEF1CQ8N431 466 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 MAGEC3Q8TD91 643 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 DNAJC12Q9UKB3 198 aa21.7■■□□□ 1.06
PPP1R3F-201ENST00000055335 ASAP2O43150 1006 aa21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 PDE6CP51160 858 aa21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 SNAP25P60880 206 aa21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 ARSHQ5FYA8 562 aa21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 CAPRIN2Q6IMN6 1127 aaKnown RBP21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 TRMT1LQ7Z2T5 733 aaKnown RBP21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 ARHGEF2Q92974 986 aaKnown RBP21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 REEP2Q9BRK0 252 aa21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 GOLGB1Q14789 3259 aaKnown RBP21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 KLRC3Q07444 240 aa21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 MAPK7Q13164 816 aa21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 ZDHHC18Q9NUE0 388 aa21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 STXBP5LQ9Y2K9 1186 aa21.69■■□□□ 1.06
PPP1R3F-201ENST00000055335 TMEM120BA0PK00 339 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 KIAA0391O15091 583 aaKnown RBP21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 ATMINO43313 823 aaPredicted RBP21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 HSPA2P54652 639 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 CCDC137Q6PK04 289 aaKnown RBP21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 RFFLQ8WZ73 363 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 ZNF570Q96NI8 536 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 DHX36Q9H2U1 1008 aaKnown RBP21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 USP15Q9Y4E8 981 aaPredicted RBP21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 PPP1R12AO14974 1030 aaPredicted RBP21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 SNX3O60493 162 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 SUN1O94901 812 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 RARAP10276 462 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 ARHGAP27Q6ZUM4 889 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 PCDHA2Q9Y5H9 948 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 PLCH1Q4KWH8 1693 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 USP17L10C9JJH3 530 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 GH1P01241 217 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 RNASELQ05823 741 aaKnown RBP21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 ITIH4Q14624 930 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 DPP8Q6V1X1 898 aaPredicted RBP21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 NEDD1Q8NHV4 660 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 BHMT2Q9H2M3 363 aa21.68■■□□□ 1.06
PPP1R3F-201ENST00000055335 ALG6Q9Y672 507 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms