RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CPLX1O14810 134 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 LINC01565O15544 149 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 HOXA2O43364 376 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 DARSP14868 501 aaKnown RBP17.89■□□□□ 0.45
ERCC1-201ENST00000013807 PLCB3Q01970 1234 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 XKR3Q5GH77 459 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 EP400NLQ6ZTU2 488 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 CASD1Q96PB1 797 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 POP1Q99575 1024 aaKnown RBP17.89■□□□□ 0.45
ERCC1-201ENST00000013807 CDCA3Q99618 268 aaPredicted RBP17.89■□□□□ 0.45
ERCC1-201ENST00000013807 TRAIPQ9BWF2 469 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 TMEM117Q9H0C3 514 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 RNF19AQ9NV58 838 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 A0A0U1RQF3 1178 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 FSCN2O14926 492 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 FGF18O76093 207 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 TDP2O95551 362 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 GLP2RO95838 553 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 EOMESO95936 686 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 ZSCAN20P17040 1043 aaPredicted RBP17.88■□□□□ 0.45
ERCC1-201ENST00000013807 LAG3P18627 525 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 TBC1D8BQ0IIM8 1120 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 TMEM184AQ6ZMB5 413 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 LRRC55Q6ZSA7 311 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 TRMT1LQ7Z2T5 733 aaKnown RBP17.88■□□□□ 0.45
ERCC1-201ENST00000013807 ADGRD2Q7Z7M1 963 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 ZNF598Q86UK7 904 aaKnown RBP17.88■□□□□ 0.45
ERCC1-201ENST00000013807 LRRC71Q8N4P6 559 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 COLGALT1Q8NBJ5 622 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 SMRP1Q8NCR6 262 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 RSPH1Q8WYR4 309 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 PHF20Q9BVI0 1012 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 UPF3BQ9BZI7 483 aaKnown RBP17.88■□□□□ 0.45
ERCC1-201ENST00000013807 IGFLR1Q9H665 355 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 TLR9Q9NR96 1032 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 CHST12Q9NRB3 414 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 TECTAO75443 2155 aa17.88■□□□□ 0.45
ERCC1-201ENST00000013807 DCXO43602 365 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 FGFR1P11362 822 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 KCNC3Q14003 757 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 NONOQ15233 471 aaKnown RBP eCLIP17.87■□□□□ 0.45
ERCC1-201ENST00000013807 PPP4R3AQ6IN85 833 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 MIER3Q7Z3K6 550 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 KRT25Q7Z3Z0 450 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 ECHDC2Q86YB7 292 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 GJA10Q969M2 543 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 AIFM3Q96NN9 605 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 PPP1R16BQ96T49 567 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 PDRG1Q9NUG6 133 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 HCN4Q9Y3Q4 1203 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 STK36Q9NRP7 1315 aa17.87■□□□□ 0.45
ERCC1-201ENST00000013807 CHMP2AO43633 222 aa17.86■□□□□ 0.45
ERCC1-201ENST00000013807 NRIP1P48552 1158 aa17.86■□□□□ 0.45
ERCC1-201ENST00000013807 NDUFV1P49821 464 aa17.86■□□□□ 0.45
ERCC1-201ENST00000013807 ERVFC1P60507 584 aa17.86■□□□□ 0.45
ERCC1-201ENST00000013807 PPP2R5CQ13362 524 aa17.86■□□□□ 0.45
ERCC1-201ENST00000013807 DUSP6Q16828 381 aa17.86■□□□□ 0.45
ERCC1-201ENST00000013807 MRPS27Q92552 414 aaKnown RBP17.86■□□□□ 0.45
ERCC1-201ENST00000013807 FAM20AQ96MK3 541 aa17.86■□□□□ 0.45
ERCC1-201ENST00000013807 KCNMB3Q9NPA1 279 aa17.86■□□□□ 0.45
ERCC1-201ENST00000013807 DACT1Q9NYF0 836 aa17.86■□□□□ 0.45
ERCC1-201ENST00000013807 PFKFB2O60825 505 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 MAFO75444 373 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-201ENST00000013807 CDKL5O76039 1030 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 ANAPC15P60006 121 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 PSMC5P62195 406 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 SCRN1Q12765 414 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 DRP2Q13474 957 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 HERC4Q5GLZ8 1057 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-201ENST00000013807 SPOUT1Q5T280 376 aaKnown RBP17.85■□□□□ 0.45
ERCC1-201ENST00000013807 ARID2Q68CP9 1835 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 ZNF410Q86VK4 478 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 LRRC43Q8N309 656 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 FAM122AQ96E09 287 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 LARP6Q9BRS8 491 aaKnown RBP17.85■□□□□ 0.45
ERCC1-201ENST00000013807 GCOM2Q9BZD3 368 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-201ENST00000013807 TLE6Q9H808 572 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 HCSTQ9UBK5 93 aa17.85■□□□□ 0.45
ERCC1-201ENST00000013807 DDX25Q9UHL0 483 aaKnown RBP17.85■□□□□ 0.45
ERCC1-201ENST00000013807 MYO10Q9HD67 2058 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 FAM86C2PA6NEL3 165 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 TBX3O15119 743 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 GCFC2P16383 781 aaKnown RBP17.84■□□□□ 0.45
ERCC1-201ENST00000013807 ATF7P17544 494 aaPredicted RBP17.84■□□□□ 0.45
ERCC1-201ENST00000013807 PPM1AP35813 382 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 DNM2P50570 870 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 CBX2Q14781 532 aaPredicted RBP17.84■□□□□ 0.45
ERCC1-201ENST00000013807 CLUL1Q15846 466 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 INF2Q27J81 1249 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 KCNT2Q6UVM3 1135 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 ANO5Q75V66 913 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 THNSL1Q8IYQ7 743 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 INO80BQ9C086 356 aaPredicted RBP17.84■□□□□ 0.45
ERCC1-201ENST00000013807 NGRNQ9NPE2 291 aaKnown RBP17.84■□□□□ 0.45
ERCC1-201ENST00000013807 PUF60Q9UHX1 559 aaKnown RBP17.84■□□□□ 0.45
ERCC1-201ENST00000013807 VAV3Q9UKW4 847 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 PPME1Q9Y570 386 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 PCDHGC5Q9Y5F6 944 aa17.84■□□□□ 0.45
ERCC1-201ENST00000013807 LOC730098B7Z3J9 87 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 SLC37A4O43826 429 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms