RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Serpinb3bQ9D1Q5 387 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Extl3Q9WVL6 918 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Slc6a16A0A1L1SR47 742 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Cdr2lA2A6T1 465 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Ttll10A4Q9F3 704 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Nova2D3YVV7 556 aaKnown RBP14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Gm8298J3QPI0 401 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 IkbkbO88351 757 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Vcam1P29533 739 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Klra9Q2TJJ8 266 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Otud5Q3U2S4 566 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Lgr6Q3UVD5 967 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Nr3c2Q8VII8 978 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Abcf2Q99LE6 628 aaKnown RBP14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Lrrc38A2VDH3 298 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Cfap221A9Q751 836 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Trappc11B2RXC1 1133 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Exoc4O35382 975 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Eef1dP57776 281 aaKnown RBP14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Gm10488Q4KL05 212 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Antxr2Q6DFX2 487 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Vipas39Q8BGQ1 491 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Phf20Q8BLG0 1010 aaKnown RBP14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Q8C1R3 189 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Col23a1Q8K4G2 532 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Fam111aQ9D2L9 613 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 MefvQ9JJ26 767 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Bnip3lQ9Z2F7 218 aa14.27□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Gm3095E9Q058 166 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 CaluO35887 315 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Ercc5P35689 1170 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Fbln1Q08879 705 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Palb2Q3U0P1 1104 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 AdigQ8R400 80 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Ears2Q9CXJ1 523 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Mms19Q9D071 1031 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Akap11E9Q777 1895 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Kcnj11Q61743 390 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Ahcyl2Q68FL4 613 aaKnown RBP14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 C8aQ8K182 587 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Cgref1Q8R1U2 281 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Trim66Q924W6 1242 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 3830403N18RikQ9D6C3 208 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Cnot8Q9D8X5 292 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Cmtr1Q9DBC3 837 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Gkap1Q9JMB0 366 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Ccdc170D3YXL0 722 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Aknad1E9Q8N6 675 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 L1camP11627 1260 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Ctnnd1P30999 938 aaKnown RBP14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Bend4P86174 541 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 GmpsQ3THK7 693 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Brd9Q3UQU0 596 aaKnown RBP14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Spa17Q62252 149 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Lrrn2Q6PHP6 730 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 SugctQ7TNE1 436 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Celf4Q7TSY6 486 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Siglec10Q80ZE3 688 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Zdhhc14Q8BQQ1 489 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Med15Q924H2 789 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Dqx1Q924H9 718 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Pnpla6Q3TRM4 1355 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Usp31E9Q6Y8 1344 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Slc10a4Q3UEZ8 437 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Tbc1d22bQ80VE5 505 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Chtf18Q8BIW9 969 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Calr3Q9D9Q6 380 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Adam22Q9R1V6 904 aa14.26□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Phlpp1Q8CHE4 1687 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 PfasQ5SUR0 1337 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Scn4aQ9ER60 1841 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Mmrn2A6H6E2 943 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Cfap70D3YVL2 1141 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Irx1P81068 480 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Daam2Q80U19 1115 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Fam118bQ8C569 351 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Hspbp1Q99P31 357 aaKnown RBP14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Cox16Q9CR63 106 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 PrameQ9D4Z5 464 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Znf609Q8BZ47 1413 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Slc35g2D3YVE8 412 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Gm10436L7N1Y3 520 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Rasgrf1P27671 1262 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Dynlt1P51807 113 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Psmc5P62196 406 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Fgfr4Q03142 799 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Calhm6Q8C9E8 313 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 PdxkQ8K183 312 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Klc4Q9DBS5 619 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Gm28036V9GXJ1 658 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Mucl2P02815 138 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 SbdsP70122 250 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Meis2P97367 477 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Tshz2Q68FE9 1030 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Dusp4Q8BFV3 398 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Wrap53Q8VC51 532 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Gimap4Q99JY3 219 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Zfyve19Q9DAZ9 389 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Akt3Q9WUA6 479 aa14.25□□□□□ -0.13
Pdgfra-205ENSMUST00000201711 Stk10O55098 966 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms