RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Cnksr2Q80YA9 1032 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 H6pdQ8CFX1 789 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gps1Q99LD4 471 aaKnown RBP12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Orc3Q9JK30 715 aaKnown RBP12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Tulp1Q9Z273 543 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gm43302L7N1X8 611 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Foxm1O08696 760 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 PtgdrP70263 357 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gbp10Q000W5 611 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Skiv2lQ6NZR5 1244 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Epc2Q8C0I4 808 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Taf6lQ8R2K4 616 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Dnajc28Q8VCE1 385 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Golga4Q91VW5 2238 aa12.5□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Igfbp6P47880 238 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Atp11aP98197 1187 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 CyldQ80TQ2 952 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Slc17a8Q8BFU8 601 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 AbraQ8BUZ1 375 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Elmo3Q8BYZ7 720 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Morc2bQ8C5W4 1022 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Calhm6Q8C9E8 313 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Pdik1lQ8QZR7 341 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Setd6Q9CWY3 473 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rbm31yQ9D3U4 565 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 1700016D06RikQ9DAA5 166 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rps6ka4Q9Z2B9 773 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Card9A2AIV8 536 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Serpinb8O08800 374 aaKnown RBP12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Arhgap6O54834 987 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Nmt1O70310 496 aaKnown RBP12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gm1604bQ3TRG0 118 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Atxn7l3bQ3UD01 97 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gngt2Q61017 69 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Nop9Q8BMC4 636 aaKnown RBP12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Adgra1Q8C4G9 578 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Arhgap29Q8CGF1 1266 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Afg3l1Q920A7 789 aaKnown RBP12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Stx12Q9ER00 274 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rabgap1lA6H6A9 815 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Cyp11b2P15539 500 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Nol4P60954 483 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 ItkQ03526 625 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ifnl2Q4VK74 193 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Znf496Q5SXI5 585 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Kctd3Q8BFX3 815 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Sap130Q8BIH0 1057 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Tasp1Q8R1G1 420 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Atp5c1Q91VR2 298 aaKnown RBP12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Fbxo3Q9DC63 480 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Homer2Q9QWW1 354 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Frmpd4A2AFR3 1320 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Xirp1O70373 1129 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gnl1P36916 607 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Cdca2Q14B71 982 aaKnown RBP12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Trim38Q5SZ99 471 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Pacsin1Q61644 441 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Hsph1Q61699 858 aaKnown RBP12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Sh3gl3Q62421 347 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Mysm1Q69Z66 819 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Krt40Q6IFX3 439 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Slf1Q8R3P9 1054 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ccdc65Q8VHI7 493 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Pcdhb12Q91Y07 789 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rrp15Q9CYX7 281 aaKnown RBP12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Trim42Q9D2H5 723 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Nphs1Q9QZS7 1256 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Akt3Q9WUA6 479 aa12.49□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Smarca1Q6PGB8 1046 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Usp17leQ7M764 540 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gpr101Q80T62 511 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ankrd45Q810N6 248 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rfx6Q8C7R7 927 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Mrgprx1Q8CIP3 322 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Dtnbp1Q91WZ8 352 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 WaslQ91YD9 501 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Alg1Q921Q3 482 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gm6370A0A0G2JGX9 315 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gm6309L7N481 315 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 GfapP03995 430 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Hspa1lP16627 641 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ifnar1P33896 590 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Yy1Q00899 414 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rcn1Q05186 325 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Shc3Q61120 474 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 CrkQ64010 304 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Naif1Q6PFD7 327 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Phf8Q80TJ7 1023 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Mtrf1lQ8BJU9 373 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Nlrp4aQ8BU40 982 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Calr3Q9D9Q6 380 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 1700013H16RikQ9DAC5 291 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Slfn1Q9Z0I7 337 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rasgrp1Q9Z1S3 795 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Abcb5B5X0E4 1255 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Foxn2E9Q7L6 429 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ttbk2Q3UVR3 1243 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Myo1gQ5SUA5 1024 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Kiaa1841Q68FF0 718 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Mageb18Q8BQR7 327 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms