RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Slc12a8Q8VI23 705 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 1700016D06RikQ9DAA5 166 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Rasa2P58069 847 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Kctd16Q5DTY9 427 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gga1Q8R0H9 635 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Afg3l1Q920A7 789 aaKnown RBP11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Hic2Q9JLZ6 619 aaKnown RBP11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Cdhr2E9Q7P9 1308 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Herc3A6H6S0 1050 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 InscQ3HNM7 579 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ccz1Q8C1Y8 480 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Fbxl5Q8C2S5 690 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Vps37aQ8CHS8 397 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tmem134Q8R0J4 195 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ddx39aQ8VDW0 427 aaKnown RBP11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Dhx58Q99J87 678 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tmem2Q5FWI3 1383 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gsdmc4Q3TR54 480 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Flt4P35917 1363 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 C87977A2A958 498 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gm8879F6R3J9 157 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Faf1P54731 649 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Upf3bQ3ULL6 472 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Nlrp4aQ8BU40 982 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tcp11l2Q8K1H7 517 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tmco4Q91WU4 631 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ppp1r3fQ9JIG4 799 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Hoxc10P31257 342 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 FcgrtQ61559 365 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Krt75Q8BGZ7 551 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Drd5Q8BLD9 478 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Lig4Q8BTF7 911 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Zc3h4Q6ZPZ3 1304 aaKnown RBP11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ttc30a2A2AKQ8 664 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Hpcal4Q8BGZ1 191 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 ScgnQ91WD9 276 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ttc30a1Q99J38 664 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ttc30bQ9CY00 664 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Txnrd1Q9JMH6 613 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gm11985A0A1B0GS61 206 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Msx3P70354 204 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Cdk8Q8R3L8 464 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Map7d3A2AEY4 876 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 A630010A05RikA9C473 232 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gm28042B7ZCM9 1014 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 HnmtQ91VF2 295 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Homer3Q99JP6 356 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Apba1B2RUJ5 842 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Thumpd3P97770 505 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Usp44Q8C2S0 711 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Rfx6Q8C7R7 927 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gpc5Q8CAL5 572 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 McamQ8R2Y2 648 aaKnown RBP11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gimap4Q99JY3 219 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Castor1Q9CWQ8 331 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Dnaaf1Q9D2H9 634 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 GdaQ9R111 454 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Kiaa0232Q80U59 1396 aaKnown RBP11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Lrriq4A6H6A4 596 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Olfr552E9Q545 317 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Serpina5P70458 405 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Nol6Q8R5K4 1152 aaKnown RBP11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Hdac11Q91WA3 347 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 ErmapQ9JLN5 566 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Cyth1Q9QX11 398 aa11.12□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Bfsp2Q6NVD9 416 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Naa35Q6PHQ8 725 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Zfp418Q8BFS8 652 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 UvragQ8K245 698 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 H2afyQ9QZQ8 372 aaKnown RBP11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Rap1gds1E9Q912 607 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Fam228bQ497Q6 232 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Lrig2Q52KR2 1054 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 PigsQ6PD26 555 aaKnown RBP11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ccdc151Q8BSN3 593 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Krt27Q9Z320 448 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 VdrP48281 422 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 PrcpQ7TMR0 491 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Alox15P39654 663 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Nek1P51954 1203 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ice2Q3UZ18 988 aaKnown RBP11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Wdr27Q8C5V5 780 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 4930504O13RikQ8C5Z9 145 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gm16430A6X8J1 155 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Psma3O70435 255 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Eif1adQ3THJ3 170 aaKnown RBP11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Spdye4aQ5IBH6 268 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Wdr35Q8BND3 1181 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 ParvaQ9EPC1 372 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Slc5a4aQ9ET37 656 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gm11549A0A286YD83 63 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Snx5Q9D8U8 404 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Nfe2l3Q9WTM4 660 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ttll10A4Q9F3 704 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 D1Pas1P16381 660 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Eps15l1Q60902 907 aaKnown RBP11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Otub1Q7TQI3 271 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gtf3c4Q8BMQ2 817 aaKnown RBP11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ppm1kQ8BXN7 372 aa11.11□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Trim32Q8CH72 655 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 137.4 ms