RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Sema4dO09126 861 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Krt86P97861 486 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tceal1Q921P9 165 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gps1Q99LD4 471 aaKnown RBP9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 GgcxQ9QYC7 757 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Casq2O09161 415 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Aoc3O70423 765 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Slc4a1P04919 929 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Man1a2P39098 641 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cav1P49817 178 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Smad1P70340 465 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 BC051142Q3V0M8 400 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 PolrmtQ8BKF1 1207 aaKnown RBP9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Osbpl9A2A8Z1 736 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Lrrc63A6H694 637 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Nedd4P46935 887 aaKnown RBP9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Apol7eQ3UZ24 369 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Khdrbs1Q60749 443 aaKnown RBP9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 PodnQ7TQ62 611 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Sept9Q80UG5 583 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Trip10Q8CJ53 603 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Chn1Q91V57 459 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tc2nQ91XT6 489 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Wars2Q9CYK1 360 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gm5795E9PZN8 263 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Chil3O35744 398 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 CsadQ9DBE0 493 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Krt17Q9QWL7 433 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pou5f1P20263 352 aaKnown RBP9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Creb3Q61817 404 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Serpinb3dQ6UKZ0 387 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Daam1Q8BPM0 1077 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Morc2bQ8C5W4 1022 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Them5Q9CQJ0 248 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ifi207E9Q3L4 978 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Il2P04351 169 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Exosc10P56960 887 aaKnown RBP9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pid1Q3UBG2 217 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Zbtb8osQ505B7 168 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tlr13Q6R5N8 991 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Usp17leQ7M764 540 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Snip1Q8BIZ6 383 aaKnown RBP9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Calhm6Q8C9E8 313 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Trpv6Q91WD2 767 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tlr3Q99MB1 905 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Sgpp1Q9JI99 430 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pard6bQ9JK83 371 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cpsf3Q9QXK7 684 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 D1Pas1P16381 660 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Akr1b1P45376 316 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Slc2a13Q3UHK1 637 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ccdc33Q3ULW6 985 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 ItgaeQ60677 1167 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Mrpl11Q9CQF0 192 aaKnown RBP9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tnni1Q9WUZ5 187 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cdhr2E9Q7P9 1308 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Vmn2r71L7N2D8 855 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ifnb1P01575 182 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cops2P61202 443 aaKnown RBP9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Qrich1Q3UA37 777 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Fam183bQ5NC57 135 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Smg5Q6ZPY2 1017 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Vipas39Q8BGQ1 491 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cpa5Q8R4H4 436 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Setd3Q91WC0 594 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Nsmce3Q9CPR8 279 aa9.98□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pdcd11Q6NS46 1862 aaKnown RBP9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 GpiP06745 558 aaKnown RBP9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Wfs1P56695 890 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Q80Y73 168 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Add1Q9QYC0 735 aaKnown RBP9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Nr1i3O35627 358 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cacnb3P54285 484 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Trmt10cQ3UFY8 414 aaKnown RBP9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Lamc2Q61092 1191 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Slc7a14Q8BXR1 771 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Nudcd3Q8R1N4 363 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Olfr390Q8VEZ7 311 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ing2Q9ESK4 281 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gm20721E9Q2U8 318 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Trim72Q1XH17 477 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Heatr9Q5QNV8 569 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Bag5Q8CI32 447 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gga1Q8R0H9 635 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Plekha4Q8VC98 588 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Anapc7Q9WVM3 565 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 MeiocA2AG06 965 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Arhgap4B1AUY3 965 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ccdc62E9PVD1 701 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 CraddO88843 199 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pik3r1P26450 724 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Atp9bP98195 1146 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pla2g4cQ64GA5 597 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 CtifQ6PEE2 600 aaKnown RBP9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Bzw1Q9CQC6 419 aaKnown RBP9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 4921524L21RikQ9D5T2 438 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gnl1P36916 607 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Faf1P54731 649 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tubgcp3P58854 905 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Zfp956Q3UZY6 572 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms