RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Baiap3Q80TT2 1134 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 BaatQ91X34 420 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Tex12Q9CR81 123 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 IkbipQ9DBZ1 373 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Runx1t1Q61909 577 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Mrpl47Q8K2Y7 252 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 CoblQ5NBX1 1337 aaKnown RBP17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Myh4Q5SX39 1939 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 TprnA2AI08 749 aaKnown RBP17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 CsadQ9DBE0 493 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 C87499Q3UX49 493 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Usp44Q8C2S0 711 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 IydQ9DCX8 285 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 L3mbtl1A2A5N8 826 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Eef2kO08796 724 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Art2bO35975 289 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Snx12O70493 165 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Dbndd2Q9CRD4 158 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Trim12cD3Z3L3 497 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Cyp3a25O09158 503 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Lrrc8dQ8BGR2 859 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Hic1Q9R1Y5 733 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Rbm42Q91V81 474 aaKnown RBP17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Cdk9Q99J95 372 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Sh2d4aQ9D7V1 421 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Suclg2Q9Z2I8 433 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Papd5Q68ED3 633 aaKnown RBP17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Fhod1Q6P9Q4 1197 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Unc5clQ6R653 518 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Chordc1Q9D1P4 331 aaKnown RBP17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Kcnk9Q3LS21 402 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Gucy2gQ6TL19 1100 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Adcy2Q80TL1 1090 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Gap43P06837 227 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Dab1P97318 588 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Tlr3Q99MB1 905 aa17.62■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Eddm13E9Q7F5 164 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 GypcQ78HU7 95 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Sv2cQ69ZS6 727 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 AdalQ80SY6 360 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Q9CR55 154 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Pik3r1P26450 724 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Sik1Q60670 779 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Ces5aQ6AW46 575 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 PhkbQ7TSH2 1085 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 A530032D15RikE9Q422 215 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Copb2O55029 905 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Atf5O70191 283 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 S100gP97816 79 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Dpcr1Q3TNW5 500 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Xxylt1Q3U4G3 392 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Prr18Q6PAN7 307 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Q922C1 641 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Myh8P13542 1937 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 TrabdQ99JY4 376 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Tph1P17532 447 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Tmem179Q8BHH9 233 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 PighQ5M9N4 188 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Trim52Q8CDV4 233 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Ccdc103Q9D9P2 237 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Zcchc17Q9ESX4 241 aaKnown RBP17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Cyp3a57D3YYZ0 503 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Cpb2Q9JHH6 422 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Rnf4Q9QZS2 194 aa17.61■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Chd4Q6PDQ2 1915 aaKnown RBP17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 NyxP83503 476 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Mrps26Q80ZS3 200 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Klhl31Q8BWA5 634 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Trim12aQ99PQ1 284 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 AatkQ80YE4 1365 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Vmn2r79E9Q067 851 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Mysm1Q69Z66 819 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Armcx2Q6A058 784 aaKnown RBP17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Spag6Q9JLI7 507 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 DffaO54786 331 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Eno1P17182 434 aaKnown RBP17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Utp14bQ6EJB6 756 aaKnown RBP17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Unc45bQ8CGY6 931 aaKnown RBP17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Homer3Q99JP6 356 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Serpina1aP07758 413 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Pla2g4aP47713 748 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Serpina1cQ00896 412 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Serpina1dQ00897 413 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 ChukQ60680 745 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Zkscan3Q91VW9 553 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Chmp2aQ9DB34 222 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Gm5926E9PWJ8 236 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Tmem206Q9D771 350 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Foxp4Q9DBY0 795 aaKnown RBP17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Ttc38A3KMP2 465 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Nt5c2Q3V1L4 560 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Klhl11Q8CE33 709 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Ap3m2Q8R2R9 418 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Abtb1Q99LJ2 478 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Mei1Q9D4I2 1268 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 PudpQ9D5U5 234 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Ugt1a5B2RT14 529 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Sept8Q8CHH9 429 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Fbxo18Q8K2I9 1042 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Pgm1Q9D0F9 562 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms