RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 EnahQ03173 802 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rasip1Q3U0S6 961 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ppp2r5eQ61151 467 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Glg1Q61543 1175 aaKnown RBP12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Mcf2lQ64096 1149 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Slc7a6osQ7TPE5 306 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Mageb18Q8BQR7 327 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Trim68Q8K243 485 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Trpm8Q8R4D5 1104 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Nmrk1Q91W63 195 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Prpf4Q9DAW6 521 aaKnown RBP12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Trpm3Q5F4S9 1721 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Prdm2A2A7B5 1709 aaKnown RBP12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Mroh8E9PYI4 1049 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Smarcad1Q04692 1021 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ppp1r13lQ5I1X5 824 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Usp20Q8C6M1 916 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 PdxkQ8K183 312 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Nudt12Q9DCN1 462 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Aox3G3X982 1335 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Atf2P16951 487 aaKnown RBP12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Akr1b7P21300 316 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Sin3bQ62141 1098 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 R3hdm2Q80TM6 1044 aaKnown RBP12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ddx42Q810A7 929 aaKnown RBP12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ythdf3Q8BYK6 585 aaKnown RBP12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Fam111aQ9D2L9 613 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Sdr42e1Q9D665 394 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 FscbA1EGX6 1074 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Cacna2d2Q6PHS9 1154 aa12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Zfp839E9PUU5 921 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Speer4f2E9Q366 295 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Trim65Q8BFW4 522 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Eno4Q8C042 619 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Epc2Q8C0I4 808 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Fthl17aQ9DAX0 182 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Orc3Q9JK30 715 aaKnown RBP12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Lgr5Q9Z1P4 907 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Net1Q9Z206 595 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 GakQ99KY4 1305 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Gm8298J3QPI0 401 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Mboat4P0C7A3 435 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Epha3P29319 983 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rhbdl3P58873 404 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Sorbs1Q62417 1290 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Phc1Q64028 1012 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 SnphQ80U23 495 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Snip1Q8BIZ6 383 aaKnown RBP12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rbbp5Q8BX09 538 aaKnown RBP12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Dennd2aQ8C4S8 1000 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Lrrc8cQ8R502 803 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Wbp11Q923D5 641 aaKnown RBP12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Gdf11Q9Z1W4 405 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Slit3Q9WVB4 1523 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Lbhd1A0A087WPA0 259 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Scgb2b7D3YYY1 112 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rfpl4bJ3QPR6 266 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 VdrP48281 422 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Yy1Q00899 414 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 4930502E18RikQ14BQ3 236 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Chtf18Q8BIW9 969 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rapgef3Q8VCC8 918 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rpa1Q8VEE4 623 aaKnown RBP12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Scgb2b20Q9JI02 112 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 PplQ9R269 1755 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Krt90E9Q1Z0 538 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ugt1a2P70691 533 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Creb1Q01147 341 aaKnown RBP12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ddr1Q03146 911 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Cnga4Q3UW12 575 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rgl1Q60695 768 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Abhd8Q8R0P8 439 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Mxra8Q9DBV4 442 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rasgrp1Q9Z1S3 795 aa12.17□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Lzts1P60853 599 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Lrrc43Q3V0L5 667 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Sp4Q62445 782 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Zbtb44Q8R0A2 453 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Senp2Q91ZX6 588 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Setd6Q9CWY3 473 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 IkbipQ9DBZ1 373 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Nr1i3O35627 358 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 AurkbO70126 345 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Calb1P12658 261 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 NfixP70257 488 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 CcnjlQ5SRT8 387 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Gas7Q60780 421 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 TbataQ7TSD4 393 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Pop1Q8K205 1045 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 AagabQ8R2R3 316 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Slc12a6Q924N4 1150 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Nsmce1Q9D720 266 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 PycardQ9EPB4 193 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 BcamQ9R069 622 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Myh13B1AR69 1938 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Olfr552E9Q545 317 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Grem2O88273 168 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Aco1P28271 889 aaKnown RBP12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 SkiQ60698 725 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Arid3aQ62431 601 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms