RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 A430078G23RikE9Q7Y4 484 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Cdca2Q14B71 982 aaKnown RBP11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ccdc110Q3V125 848 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Sept11Q8C1B7 431 aaKnown RBP11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 BlmhQ8R016 455 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Trub2Q91WG3 331 aaKnown RBP11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Fgd4Q91ZT5 766 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Kctd10Q922M3 315 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Aipl1Q924K1 328 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Nsmce1Q9D720 266 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Slc5a4aQ9ET37 656 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Cul1Q9WTX6 776 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Atp8b5A3FIN4 1183 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Slc35g2D3YVE8 412 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Pola2P33611 600 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Gnl1P36916 607 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ephb2P54763 986 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ugt1a2P70691 533 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Mars2Q499X9 586 aaKnown RBP11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Trpc6Q61143 930 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Retreg2Q6NS82 541 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Usp17leQ7M764 540 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Rpa1Q8VEE4 623 aaKnown RBP11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ttc1Q91Z38 292 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Psip1Q99JF8 528 aaKnown RBP11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Pls3Q99K51 630 aa11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 HibadhQ99L13 335 aaKnown RBP11.46□□□□□ -0.57
Rnf40-201ENSMUST00000033088 CpdO89001 1377 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Rnaseh1O70338 285 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Zscan2Q07230 614 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Tmtc2Q56A06 836 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Papd7Q6PB75 542 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Tdpoz4Q6YCH2 370 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 SnphQ80U23 495 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Usp38Q8BW70 1042 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 N4bp3Q8C7U1 537 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Dnm1lQ8K1M6 742 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Arhgef7Q9ES28 862 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Dnajb7Q9QYI8 312 aa11.46□□□□□ -0.58
Rnf40-201ENSMUST00000033088 4933406M09RikG3XA12 479 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Pfkfb2P70265 519 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 AmphQ7TQF7 686 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Slc26a6Q8CIW6 758 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ppp2r5dQ91V89 594 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Nmrk1Q91W63 195 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Atad3Q925I1 591 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Setd6Q9CWY3 473 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Drap1Q9D6N5 205 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Olr1Q9EQ09 363 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Osbpl9A2A8Z1 736 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Pus7B7ZNL8 666 aaKnown RBP11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Pdzrn4E9PUZ9 1014 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gm4758L7N258 96 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Kcna3P16390 528 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Pid1Q3UBG2 217 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Wbp4Q61048 376 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Krt31Q61765 416 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ugt1a9Q62452 528 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ano4Q8C5H1 955 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Fbxl13Q8CDU4 790 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Mmgt1Q8K273 131 aaKnown RBP11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Dync1li1Q8R1Q8 523 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Sh2d3cQ9QZS8 854 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Rasgrp1Q9Z1S3 795 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Lrp6O88572 1613 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 A630010A05RikA9C473 232 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Olfr552E9Q545 317 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 CopeO89079 308 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Adcy7P51829 1099 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gbp8Q2V6D6 525 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Phactr4Q501J7 694 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Asap3Q5U464 904 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Map3k7Q62073 579 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Nlrp14Q6B966 993 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Acad11Q80XL6 779 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Fam204aQ8C6C7 236 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 H6pdQ8CFX1 789 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Pop1Q8K205 1045 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Chchd3Q9CRB9 227 aaKnown RBP11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Rtn3Q9ES97 964 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gtf2iQ9ESZ8 998 aaKnown RBP11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Crlf3Q9Z2L7 442 aa11.45□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ttc38A3KMP2 465 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gm5814J3QP80 125 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 InhbeO08717 350 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 IkbkgO88522 412 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Kcna1P16388 495 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ssxb5Q6XAS2 159 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gramd1bQ80TI0 738 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Mrfap1Q9CQL7 125 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Xab2Q9DCD2 855 aaKnown RBP11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Dach1Q9QYB2 751 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Azi2Q9QYP6 405 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Plod1Q9R0E2 728 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 GsdmeQ9Z2D3 512 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Btbd18A0A0A6YY25 723 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Tex11Q14AT2 947 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Lrrn2Q6PHP6 730 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Slitrk3Q810B9 980 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Susd4Q8BH32 490 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms