RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Rsph10bE9PYQ0 876 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Svs3aF2Z472 265 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Mmp3P28862 477 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Dnm2P39054 870 aaKnown RBP12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Tnni3P48787 211 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Dlg3P70175 849 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Mcm6P97311 821 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Kiaa1468Q148V7 1216 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Pnpla5Q32LZ8 432 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 ChpfQ6IQX7 774 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Exoc3Q6KAR6 755 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Atp1a3Q6PIC6 1013 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Usp38Q8BW70 1042 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Rbm34Q8C5L7 375 aaKnown RBP12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Glis1Q8K1M4 789 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Bloc1s4Q8VED2 215 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 B4galt3Q91YY2 395 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Ier5lQ99J55 406 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Ttyh1Q9D3A9 450 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Cnpy2Q9QXT0 182 aa12.63□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Slc16a6B1AT66 607 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Xpnpep3B7ZMP1 506 aaKnown RBP12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Fam124aD3Z5V4 536 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Heatr4E9Q357 955 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Gm4841E9QAA8 417 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Idh1O88844 414 aaKnown RBP12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Yap1P46938 488 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Sparcl1P70663 650 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Arhgef16Q3U5C8 713 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Xpnpep1Q6P1B1 623 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Ssh1Q76I79 1042 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Hook2Q7TMK6 716 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Actn1Q7TPR4 892 aaKnown RBP12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Ctdspl2Q8BG15 465 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 R3hcc1Q8BSI6 488 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Zfp120Q8BZW4 436 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Fam78aQ8C552 283 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Fam20aQ8CID3 541 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 E2f4Q8R0K9 410 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Vwa1Q8R2Z5 415 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Cacnb1Q8R3Z5 597 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Rem2Q8VEL9 341 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Adcy3Q8VHH7 1145 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Krt82Q99M74 516 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Tlr6Q9EPW9 795 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Krt85Q9Z2T6 507 aa12.62□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Gm45194A0A140LJG2 572 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Apol7aB2RT54 418 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Arhgef26D3YYY8 869 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Trim30bE9PVL6 203 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Vmn2r71L7N2D8 855 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 PtenO08586 403 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Msh3P13705 1091 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Ogfod1Q3U0K8 545 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Capn13Q3UW68 665 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Pex1Q5BL07 1284 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Olfr119Q7TRJ5 321 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Smad3Q8BUN5 425 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Tdrd7Q8K1H1 1086 aaKnown RBP12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Mtmr3Q8K296 1196 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 PccaQ91ZA3 724 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Slc12a9Q99MR3 914 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Vmn1r65Q9EPS7 332 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 PigoQ9JJI6 1093 aa12.61□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Myh9Q8VDD5 1960 aaKnown RBP12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Fpr-rs4A4FUQ5 323 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Rasa1E9PYG6 1038 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Cyp2b23E9Q593 491 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Kng1O08677 661 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Mdm4O35618 489 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 AurkbO70126 345 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Clec11aO88200 328 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Casp14O89094 257 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Lamp2P17047 415 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Ccl5P30882 91 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Ifnar1P33896 590 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Fmr1P35922 614 aaKnown RBP12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Hps5P59438 1126 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Smpd1Q04519 627 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Gse1Q3U3C9 1213 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Grxcr1Q50H32 290 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Git1Q68FF6 770 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Mbtd1Q6P5G3 631 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 PoliQ6R3M4 717 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 IqcgQ80W32 419 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Slc38a7Q8BWH0 463 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Znf467Q8JZL0 594 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Upb1Q8VC97 393 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Slc14a1Q8VHL0 384 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Ccer1Q9CQL2 403 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Smyd3Q9CWR2 428 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Mis18aQ9CZJ6 204 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 B4galt5Q9JMK0 388 aa12.6□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Cyp4a29A0A087WPC3 509 aa12.59□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Ace3D0G895 737 aa12.59□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Vmn2r87E9PZX4 848 aa12.59□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Zfp882E9Q4R4 555 aa12.59□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Gm3739L7N296 216 aa12.59□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Scp2P32020 547 aaKnown RBP12.59□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Rasa2P58069 847 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms