RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Gm45837F7D3W5 961 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Fkbp4P30416 458 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Crhr1P35347 415 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Sdc2P43407 202 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Ubxn7Q6P5G6 467 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Sval3Q76I99 144 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Phf20Q8BLG0 1010 aaKnown RBP12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Btbd9Q8C726 612 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Mnd1Q8K396 205 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 ItpkaQ8R071 459 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Pde2aQ922S4 916 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Slc24a3Q99PD7 645 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Rab11fip1Q9D620 645 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Pex11aQ9Z211 246 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Mtmr7Q9Z2C9 660 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Ap1arE9PYF7 298 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Stag3O70576 1240 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Gsta3P30115 221 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Pdha2P35487 391 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Dnm2P39054 870 aaKnown RBP12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Naa20P61600 178 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 RubcnlQ3TD16 648 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Eml4Q3UMY5 988 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Cep70Q6IQY5 616 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Tmem120aQ8C1E7 343 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Trip10Q8CJ53 603 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Satb2Q8VI24 733 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Mov10l1Q99MV5 1187 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Ska1Q9CPV1 254 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Wdr45bQ9CR39 344 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Prpf4Q9DAW6 521 aaKnown RBP12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Pus3Q9JI38 481 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Dnajc7Q9QYI3 494 aa12.37□□□□□ -0.43
Trim55-201ENSMUST00000029139 Ccng2O08918 344 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Grpel2O88396 224 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 GfapP03995 430 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Fitm2P59266 262 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Q8BGA7 448 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Usp1Q8BJQ2 784 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Kcns3Q8BQZ8 491 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 H6pdQ8CFX1 789 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Def8Q99J78 448 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Dbn1Q9QXS6 706 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Angptl2Q9R045 493 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Olfr839-ps1A0A1D5RMH6 312 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Gm5936A2BG95 728 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Gm5640A3KG49 728 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Srpk1O70551 648 aaKnown RBP12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 GzmgP13366 248 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Cog7Q3UM29 770 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 DstykQ6XUX1 927 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Arhgef38Q80VK6 770 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Gm9758Q80ZT2 255 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Ranbp6Q8BIV3 1105 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Apol10aQ8CCA5 318 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Pcdhb22Q91XZ8 794 aa12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 NvlQ9DBY8 855 aaKnown RBP12.36□□□□□ -0.43
Trim55-201ENSMUST00000029139 Plekhg2Q6KAU7 1340 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Gm20509G3UZF1 325 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Crabp2P22935 138 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Elk4P41158 430 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 PhbP67778 272 aaKnown RBP12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Sycp3P70281 254 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Kansl1lQ5DTI6 991 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Nxf7Q80SZ6 620 aaKnown RBP12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 WhrnQ80VW5 918 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Impg2Q80XH2 1243 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Tgm6Q8BM11 706 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Rasal3Q8C2K5 1041 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Q8C5C9 218 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Ttc19Q8CC21 365 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Trim29Q8R2Q0 587 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 HnrnprQ8VHM5 632 aaKnown RBP12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Nt5c1bQ91YE9 573 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Ppp2r2dQ925E7 453 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Clcn2Q9R0A1 908 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Zfp853A0A1D5RM95 733 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Gm21897J3KMP5 500 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Gm21750L7N228 499 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Galnt4O08832 578 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 PtgisO35074 501 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 CenpaO35216 134 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 LdhbP16125 334 aaKnown RBP12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Kcnc2Q14B80 642 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Tmtc1Q3UV71 942 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Gstt2Q61133 244 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Itih2Q61703 946 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Efr3bQ6ZQ18 817 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Fsd1Q7TPM6 496 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Znf423Q80TS5 1292 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Dyrk4Q8BI55 632 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Ttc26Q8BS45 554 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 SdsQ8VBT2 327 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Ssx2ipQ8VC66 615 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Itgb3bpQ9CQ82 176 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Ttc14Q9CSP9 761 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Bbs5Q9CZQ9 341 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Gpihbp1Q9D1N2 228 aa12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Rpf2Q9JJ80 306 aaKnown RBP12.35□□□□□ -0.43
Trim55-201ENSMUST00000029139 Abca15E9PWH4 1668 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms