RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR60, Length 104 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR60	snR60	YDR341C	Q05506	607 aa	Known RBP	0.85	□□□□□ -2.27
snR60	snR60	NSE1	Q07913	336 aa		0.85	□□□□□ -2.27
snR60	snR60	TDH2	P00358	332 aa	Known RBP	0.84	□□□□□ -2.27
snR60	snR60	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.27	not detected
snR60	snR60	CDC21	P06785	304 aa		0.84	□□□□□ -2.27
snR60	snR60	RPL12A	P0CX53	165 aa	Known RBP	0.84	□□□□□ -2.27
snR60	snR60	RPL12B	P0CX54	165 aa		0.84	□□□□□ -2.27
snR60	snR60	CPT1	P17898	393 aa		0.84	□□□□□ -2.27
snR60	snR60	PMT5	P52867	743 aa		0.84	□□□□□ -2.27
snR60	snR60	CWC22	P53333	577 aa	Known RBP	0.84	□□□□□ -2.27
snR60	snR60	MRPL19	P53875	158 aa		0.84	□□□□□ -2.27
snR60	snR60	YPL113C	Q02961	396 aa		0.84	□□□□□ -2.27
snR60	snR60	TAF11	Q04226	346 aa		0.84	□□□□□ -2.27
snR60	snR60	ROY1	Q04847	553 aa		0.84	□□□□□ -2.27
snR60	snR60	PLB3	Q08108	686 aa		0.84	□□□□□ -2.27
snR60	snR60	YOL029C	Q08187	201 aa		0.84	□□□□□ -2.27
snR60	snR60	YDL109C	Q12103	647 aa		0.84	□□□□□ -2.27
snR60	snR60	RRI2	Q12348	645 aa		0.84	□□□□□ -2.27
snR60	snR60	PRP46	Q12417	451 aa	Predicted RBP	0.84	□□□□□ -2.27
snR60	snR60	TPK3	P05986	398 aa		0.83	□□□□□ -2.28
snR60	snR60	RPL23A	P0CX41	137 aa	Known RBP	0.83	□□□□□ -2.28
snR60	snR60	RPL23B	P0CX42	137 aa	Known RBP	0.83	□□□□□ -2.28
snR60	snR60	ARF1	P11076	181 aa	Known RBP	0.83	□□□□□ -2.28
snR60	snR60	MIR1	P23641	311 aa	Known RBP	0.83	□□□□□ -2.28
snR60	snR60	YCR051W	P25631	222 aa		0.83	□□□□□ -2.28
snR60	snR60	RPL16A	P26784	199 aa	Known RBP	0.83	□□□□□ -2.28
snR60	snR60	YMR262W	P38430	313 aa		0.83	□□□□□ -2.28
snR60	snR60	SMC2	P38989	1170 aa	Known RBP	0.83	□□□□□ -2.28
snR60	snR60	PCL7	P40186	285 aa		0.83	□□□□□ -2.28
snR60	snR60	SEC27	P41811	889 aa	Known RBP	0.83	□□□□□ -2.28
snR60	snR60	MNN5	P46982	586 aa		0.83	□□□□□ -2.28
snR60	snR60	EFM3	P47163	339 aa		0.83	□□□□□ -2.28
snR60	snR60	PIB2	P53191	635 aa		0.83	□□□□□ -2.28
snR60	snR60	SLT2	Q00772	484 aa		0.83	□□□□□ -2.28
snR60	snR60	URC2	Q04411	772 aa		0.83	□□□□□ -2.28
snR60	snR60	DIB1	Q06819	143 aa	Predicted RBP	0.83	□□□□□ -2.28
snR60	snR60	YDR018C	Q12185	396 aa		0.83	□□□□□ -2.28
snR60	snR60	FLO11	P08640	1367 aa		0.83	□□□□□ -2.28
snR60	snR60	REC107	P21651	314 aa		0.82	□□□□□ -2.28
snR60	snR60	PMT2	P31382	759 aa		0.82	□□□□□ -2.28
snR60	snR60	DOA1	P36037	715 aa		0.82	□□□□□ -2.28
snR60	snR60	YBL081W	P38180	368 aa	Known RBP	0.82	□□□□□ -2.28
snR60	snR60	SLM4	P38247	162 aa		0.82	□□□□□ -2.28
snR60	snR60	AIM23	P47015	356 aa		0.82	□□□□□ -2.28
snR60	snR60	SHE4	P51534	789 aa		0.82	□□□□□ -2.28
snR60	snR60	YMR010W	Q03687	405 aa		0.82	□□□□□ -2.28
snR60	snR60	GTO3	Q04806	366 aa		0.82	□□□□□ -2.28
snR60	snR60	NOP6	Q07623	225 aa	Known RBP	0.82	□□□□□ -2.28
snR60	snR60	RLP24	Q07915	199 aa	Known RBP	0.82	□□□□□ -2.28
snR60	snR60	CLP1	Q08685	445 aa	Predicted RBP	0.82	□□□□□ -2.28
snR60	snR60	OPI3	P05375	206 aa		0.81	□□□□□ -2.28
snR60	snR60	RED1	P14291	827 aa		0.81	□□□□□ -2.28
snR60	snR60	DAL81	P21657	970 aa		0.81	□□□□□ -2.28
snR60	snR60	YKR032W	P36127	104 aa		0.81	□□□□□ -2.28
snR60	snR60	ZTA1	P38230	334 aa	Known RBP	0.81	□□□□□ -2.28
snR60	snR60	EFM1	P38732	585 aa		0.81	□□□□□ -2.28
snR60	snR60	NOC2	P39744	710 aa	Known RBP	0.81	□□□□□ -2.28
snR60	snR60	SER3	P40054	469 aa		0.81	□□□□□ -2.28
snR60	snR60	YRF1-4	O13559	1382 aa		0.81	□□□□□ -2.28
snR60	snR60	MET2	P08465	486 aa		0.8	□□□□□ -2.28
snR60	snR60	RNA1	P11745	407 aa	Known RBP	0.8	□□□□□ -2.28
snR60	snR60	SLM5	P25345	492 aa	Known RBP	0.8	□□□□□ -2.28
snR60	snR60	RRP7	P25368	297 aa	Predicted RBP	0.8	□□□□□ -2.28
snR60	snR60	RSA4	P25382	515 aa	Known RBP	0.8	□□□□□ -2.28
snR60	snR60	URA7	P28274	579 aa	Known RBP	0.8	□□□□□ -2.28
snR60	snR60	NFU1	P32860	256 aa		0.8	□□□□□ -2.28
snR60	snR60	BYE1	P36106	594 aa		0.8	□□□□□ -2.28
snR60	snR60	YKR015C	P36111	568 aa		0.8	□□□□□ -2.28
snR60	snR60	BNI5	P53890	448 aa	Known RBP	0.8	□□□□□ -2.28
snR60	snR60	SCS7	Q03529	384 aa		0.8	□□□□□ -2.28
snR60	snR60	ECM19	Q06011	112 aa		0.8	□□□□□ -2.28
snR60	snR60	GAS2	Q06135	555 aa		0.8	□□□□□ -2.28
snR60	snR60	CDD1	Q06549	142 aa		0.8	□□□□□ -2.28
snR60	snR60	GAT3	Q07928	141 aa		0.8	□□□□□ -2.28
snR60	snR60	SGT2	Q12118	346 aa	Known RBP	0.8	□□□□□ -2.28
snR60	snR60	SFI1	Q12369	946 aa		0.8	□□□□□ -2.28
snR60	snR60	BGL2	P15703	313 aa	Known RBP	0.79	□□□□□ -2.28
snR60	snR60	KRE1	P17260	313 aa		0.79	□□□□□ -2.28
snR60	snR60	RPB9	P27999	122 aa		0.79	□□□□□ -2.28
snR60	snR60	RIM1	P32445	135 aa	Known RBP	0.79	□□□□□ -2.28
snR60	snR60	QDR3	P38227	689 aa		0.79	□□□□□ -2.28
snR60	snR60	RRG9	P40156	214 aa		0.79	□□□□□ -2.28
snR60	snR60	BUD13	P46947	266 aa	Predicted RBP	0.79	□□□□□ -2.28
snR60	snR60	BAT2	P47176	376 aa	Known RBP	0.79	□□□□□ -2.28
snR60	snR60	YDR222W	Q04925	415 aa		0.79	□□□□□ -2.28
snR60	snR60	PEX30	Q06169	523 aa		0.79	□□□□□ -2.28
snR60	snR60	YLR456W	Q06199	204 aa		0.79	□□□□□ -2.28
snR60	snR60	YPL264C	Q08980	353 aa		0.79	□□□□□ -2.28
snR60	snR60	YPR063C	Q12160	140 aa		0.79	□□□□□ -2.28
snR60	snR60	AFI1	Q99222	893 aa		0.79	□□□□□ -2.28
snR60	snR60	ADH3	P07246	375 aa	Known RBP	0.78	□□□□□ -2.28
snR60	snR60	CTA1	P15202	515 aa		0.78	□□□□□ -2.28
snR60	snR60	SSE1	P32589	693 aa	Known RBP	0.78	□□□□□ -2.28
snR60	snR60	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.78	□□□□□ -2.28	not detected
snR60	snR60	MED8	P38304	223 aa		0.78	□□□□□ -2.28
snR60	snR60	LSM5	P40089	93 aa	Known RBP	0.78	□□□□□ -2.28
snR60	snR60	PAC11	P40960	533 aa		0.78	□□□□□ -2.28
snR60	snR60	YPL080C	Q02826	108 aa		0.78	□□□□□ -2.28
snR60	snR60	CSI1	Q04368	295 aa		0.78	□□□□□ -2.28
snR60	snR60	MMT2	Q08970	484 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms