RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W ATP11P32453 318 aa3.67□□□□□ -1.82
PUB1YNL016W GCG1P32656 232 aaKnown RBP3.67□□□□□ -1.82
PUB1YNL016W REC114P32841 428 aa3.67□□□□□ -1.82
PUB1YNL016W PPS1P38148 807 aa3.67□□□□□ -1.82
PUB1YNL016W RRP4P38792 359 aaKnown RBP3.67□□□□□ -1.82
PUB1YNL016W MTW1P39731 289 aa3.67□□□□□ -1.82
PUB1YNL016W YMR134WP40207 237 aa3.67□□□□□ -1.82
PUB1YNL016W YJL163CP46996 555 aa3.67□□□□□ -1.82
PUB1YNL016W GLG2P47011 380 aa3.67□□□□□ -1.82
PUB1YNL016W YJL118WP47022 219 aa3.67□□□□□ -1.82
PUB1YNL016W BUL1P48524 976 aa3.67□□□□□ -1.82
PUB1YNL016W PYK2P52489 506 aaKnown RBP3.67□□□□□ -1.82
PUB1YNL016W RMR1P53060 241 aa3.67□□□□□ -1.82
PUB1YNL016W NMA2P53204 395 aa3.67□□□□□ -1.82
PUB1YNL016W SNO2P53823 222 aa3.67□□□□□ -1.82
PUB1YNL016W SPP2Q02521 185 aa3.67□□□□□ -1.82
PUB1YNL016W HER2Q03557 464 aa3.67□□□□□ -1.82
PUB1YNL016W ENT5Q03769 411 aaKnown RBP3.67□□□□□ -1.82
PUB1YNL016W SNU56Q03782 492 aaKnown RBP3.67□□□□□ -1.82
PUB1YNL016W SNT309Q06091 175 aaPredicted RBP3.67□□□□□ -1.82
PUB1YNL016W LOT6Q07923 191 aa3.67□□□□□ -1.82
PUB1YNL016W YPQ1Q12010 308 aa3.67□□□□□ -1.82
PUB1YNL016W GLE1Q12315 538 aa3.67□□□□□ -1.82
PUB1YNL016W HRT3Q12347 344 aa3.67□□□□□ -1.82
PUB1YNL016W UBA3Q99344 299 aa3.67□□□□□ -1.82
PUB1YNL016W RAD3P06839 778 aa3.66□□□□□ -1.82
PUB1YNL016W RPS16AP0CX51 143 aaKnown RBP3.66□□□□□ -1.82
PUB1YNL016W RPS16BP0CX52 143 aaKnown RBP3.66□□□□□ -1.82
PUB1YNL016W MATALPHA1P0CY06 175 aa3.66□□□□□ -1.82
PUB1YNL016W HMLALPHA1P0CY07 175 aa3.66□□□□□ -1.82
PUB1YNL016W APA2P22108 325 aa3.66□□□□□ -1.82
PUB1YNL016W DBR1P24309 405 aaKnown RBP3.66□□□□□ -1.82
PUB1YNL016W CLB2P24869 491 aa3.66□□□□□ -1.82
PUB1YNL016W PBN1P25580 416 aa3.66□□□□□ -1.82
PUB1YNL016W ITR1P30605 584 aa3.66□□□□□ -1.82
PUB1YNL016W MSN2P33748 704 aa3.66□□□□□ -1.82
PUB1YNL016W COS9P36034 407 aa3.66□□□□□ -1.82
PUB1YNL016W MIA40P36046 403 aa3.66□□□□□ -1.82
PUB1YNL016W OPY1P38271 328 aa3.66□□□□□ -1.82
PUB1YNL016W YMR262WP38430 313 aa3.66□□□□□ -1.82
PUB1YNL016W UTP25P40498 721 aaKnown RBP3.66□□□□□ -1.82
PUB1YNL016W SNL1P40548 159 aa3.66□□□□□ -1.82
PUB1YNL016W LYS20P48570 428 aaKnown RBP3.66□□□□□ -1.82
PUB1YNL016W ORC5P50874 479 aa3.66□□□□□ -1.82
PUB1YNL016W PMT5P52867 743 aa3.66□□□□□ -1.82
PUB1YNL016W RIM8P53179 542 aa3.66□□□□□ -1.82
PUB1YNL016W CUS2P53830 285 aaPredicted RBP3.66□□□□□ -1.82
PUB1YNL016W NOP13P53883 403 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
PUB1YNL016W MRP51Q02950 344 aa3.66□□□□□ -1.82
PUB1YNL016W IZH1Q03419 316 aa3.66□□□□□ -1.82
PUB1YNL016W TRS23Q03784 219 aa3.66□□□□□ -1.82
PUB1YNL016W GMC2Q06201 188 aa3.66□□□□□ -1.82
PUB1YNL016W BSP1Q06604 576 aa3.66□□□□□ -1.82
PUB1YNL016W YDL057WQ07379 328 aa3.66□□□□□ -1.82
PUB1YNL016W YLR040CQ07988 224 aa3.66□□□□□ -1.82
PUB1YNL016W YPR022CQ12139 1133 aa3.66□□□□□ -1.82
PUB1YNL016W YLL053CP0CD98 152 aa3.65□□□□□ -1.82
PUB1YNL016W RPL12AP0CX53 165 aaKnown RBP3.65□□□□□ -1.82
PUB1YNL016W RPL12BP0CX54 165 aa3.65□□□□□ -1.82
PUB1YNL016W MATALPHA2P0CY08 210 aa3.65□□□□□ -1.82
PUB1YNL016W HMLALPHA2P0CY09 210 aa3.65□□□□□ -1.82
PUB1YNL016W NHP6BP11633 99 aaKnown RBP3.65□□□□□ -1.82
PUB1YNL016W MTF1P14908 341 aaKnown RBP3.65□□□□□ -1.82
PUB1YNL016W TYR1P20049 452 aa3.65□□□□□ -1.82
PUB1YNL016W ZRC1P20107 442 aa3.65□□□□□ -1.82
PUB1YNL016W RRT12P25381 491 aa3.65□□□□□ -1.82
PUB1YNL016W CIN8P27895 1000 aa3.65□□□□□ -1.82
PUB1YNL016W DEG1P31115 442 aaKnown RBP3.65□□□□□ -1.82
PUB1YNL016W CYS4P32582 507 aaKnown RBP3.65□□□□□ -1.82
PUB1YNL016W HIS7P33734 552 aaKnown RBP3.65□□□□□ -1.82
PUB1YNL016W MRPL10P36520 322 aa3.65□□□□□ -1.82
PUB1YNL016W YBR056WP38081 501 aa3.65□□□□□ -1.82
PUB1YNL016W BNA4P38169 460 aa3.65□□□□□ -1.82
PUB1YNL016W UBA4P38820 440 aa3.65□□□□□ -1.82
PUB1YNL016W EGD2P38879 174 aaKnown RBP3.65□□□□□ -1.82
PUB1YNL016W YAL037WP39728 267 aa3.65□□□□□ -1.82
PUB1YNL016W BTT1P40314 149 aaPredicted RBP3.65□□□□□ -1.82
PUB1YNL016W SYG1P40528 902 aa3.65□□□□□ -1.82
PUB1YNL016W HXT9P40885 567 aa3.65□□□□□ -1.82
PUB1YNL016W CDC1P40986 491 aa3.65□□□□□ -1.82
PUB1YNL016W VPS25P47142 202 aa3.65□□□□□ -1.82
PUB1YNL016W HXT11P54862 567 aa3.65□□□□□ -1.82
PUB1YNL016W YML122CQ03207 126 aa3.65□□□□□ -1.82
PUB1YNL016W HSP31Q04432 237 aa3.65□□□□□ -1.82
PUB1YNL016W GIM5Q04493 163 aa3.65□□□□□ -1.82
PUB1YNL016W BUR2Q05949 395 aa3.65□□□□□ -1.82
PUB1YNL016W ARO10Q06408 635 aa3.65□□□□□ -1.82
PUB1YNL016W CDD1Q06549 142 aa3.65□□□□□ -1.82
PUB1YNL016W RAD34Q06665 692 aa3.65□□□□□ -1.82
PUB1YNL016W GRS2Q06817 618 aa3.65□□□□□ -1.82
PUB1YNL016W PAM18Q07914 168 aa3.65□□□□□ -1.82
PUB1YNL016W SRO7Q12038 1033 aa3.65□□□□□ -1.82
PUB1YNL016W YOR029WQ12243 111 aa3.65□□□□□ -1.82
PUB1YNL016W FSH3Q99369 266 aa3.65□□□□□ -1.82
PUB1YNL016W ADH2P00331 348 aaKnown RBP3.64□□□□□ -1.83
PUB1YNL016W RAD52P06778 471 aaKnown RBP3.64□□□□□ -1.83
PUB1YNL016W MRP2P10663 115 aaPredicted RBP3.64□□□□□ -1.83
PUB1YNL016W RAD57P25301 460 aa3.64□□□□□ -1.83
PUB1YNL016W SAC1P32368 623 aaKnown RBP3.64□□□□□ -1.83
PUB1YNL016W PTR2P32901 601 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 84.3 ms