RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C YIM1P28625 365 aa2.55□□□□□ -2
PRE8YML092C RIM1P32445 135 aaKnown RBP2.55□□□□□ -2
PRE8YML092C CBF5P33322 483 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
PRE8YML092C MFT1P33441 392 aaKnown RBP2.55□□□□□ -2
PRE8YML092C NIC96P34077 839 aa2.55□□□□□ -2
PRE8YML092C TUL1P36096 758 aa2.55□□□□□ -2
PRE8YML092C BNA4P38169 460 aa2.55□□□□□ -2
PRE8YML092C FAD1P38913 306 aa2.55□□□□□ -2
PRE8YML092C FLO9P39712 1322 aa2.55□□□□□ -2
PRE8YML092C GAT2P40209 560 aa2.55□□□□□ -2
PRE8YML092C YRB1P41920 201 aaKnown RBP2.55□□□□□ -2
PRE8YML092C MAD3P47074 515 aa2.55□□□□□ -2
PRE8YML092C SDT1P53078 280 aa2.55□□□□□ -2
PRE8YML092C YGR079WP53249 370 aa2.55□□□□□ -2
PRE8YML092C LSM3P57743 89 aaKnown RBP2.55□□□□□ -2
PRE8YML092C YPL108WQ02872 168 aaPredicted RBP2.55□□□□□ -2
PRE8YML092C YPL107WQ02873 248 aa2.55□□□□□ -2
PRE8YML092C MSC1Q03104 513 aa2.55□□□□□ -2
PRE8YML092C NHP10Q03435 203 aa2.55□□□□□ -2
PRE8YML092C BUD22Q04347 519 aaKnown RBP2.55□□□□□ -2
PRE8YML092C RUD3Q12234 484 aaKnown RBP2.55□□□□□ -2
PRE8YML092C MDY2Q12285 212 aa2.55□□□□□ -2
PRE8YML092C Q0297Q9ZZV8 51 aa2.55□□□□□ -2
PRE8YML092C Q0144Q9ZZW2 109 aa2.55□□□□□ -2
PRE8YML092C RPB2P08518 1224 aaKnown RBP2.54□□□□□ -2
PRE8YML092C TY2A-LR1P0C2J4 438 aa2.54□□□□□ -2
PRE8YML092C TY2A-FP0CX61 438 aa2.54□□□□□ -2
PRE8YML092C TY2A-GR2P0CX62 438 aa2.54□□□□□ -2
PRE8YML092C GCD2P12754 651 aaPredicted RBP2.54□□□□□ -2
PRE8YML092C PDA1P16387 420 aaKnown RBP2.54□□□□□ -2
PRE8YML092C RPB4P20433 221 aaPredicted RBP2.54□□□□□ -2
PRE8YML092C TY2A-CP25383 438 aa2.54□□□□□ -2
PRE8YML092C IME2P32581 645 aa2.54□□□□□ -2
PRE8YML092C GCG1P32656 232 aaKnown RBP2.54□□□□□ -2
PRE8YML092C UBC6P33296 250 aaPredicted RBP2.54□□□□□ -2
PRE8YML092C HES1P35843 434 aa2.54□□□□□ -2
PRE8YML092C DOA1P36037 715 aa2.54□□□□□ -2
PRE8YML092C BMT2P38278 337 aa2.54□□□□□ -2
PRE8YML092C YGP1P38616 354 aaKnown RBP2.54□□□□□ -2
PRE8YML092C ARN1P38731 627 aa2.54□□□□□ -2
PRE8YML092C SEC28P40509 296 aaKnown RBP2.54□□□□□ -2
PRE8YML092C MIC19P43594 170 aa2.54□□□□□ -2
PRE8YML092C ALB1P47019 175 aaPredicted RBP2.54□□□□□ -2
PRE8YML092C YPT32P51996 222 aaKnown RBP2.54□□□□□ -2
PRE8YML092C MKC7P53379 596 aa2.54□□□□□ -2
PRE8YML092C PDR16P53860 351 aaKnown RBP2.54□□□□□ -2
PRE8YML092C SLT2Q00772 484 aa2.54□□□□□ -2
PRE8YML092C PFA5Q03289 374 aa2.54□□□□□ -2
PRE8YML092C TY2A-DR2Q03483 438 aa2.54□□□□□ -2
PRE8YML092C YMR155WQ03795 547 aa2.54□□□□□ -2
PRE8YML092C MIX14Q04341 121 aa2.54□□□□□ -2
PRE8YML092C YLR177WQ06251 628 aa2.54□□□□□ -2
PRE8YML092C YET3Q07451 203 aa2.54□□□□□ -2
PRE8YML092C YDL211CQ12121 372 aa2.54□□□□□ -2
PRE8YML092C TY2A-BQ12260 438 aa2.54□□□□□ -2
PRE8YML092C TY2A-OR2Q12293 438 aa2.54□□□□□ -2
PRE8YML092C YOL114CQ12322 202 aa2.54□□□□□ -2
PRE8YML092C TY2A-DR1Q12392 438 aa2.54□□□□□ -2
PRE8YML092C TY2A-OR1Q12439 438 aa2.54□□□□□ -2
PRE8YML092C YBR255C-AQ3E776 120 aa2.54□□□□□ -2
PRE8YML092C YOR019WQ99248 730 aa2.54□□□□□ -2
PRE8YML092C TY2A-DR3Q99303 438 aa2.54□□□□□ -2
PRE8YML092C SUI3P09064 285 aaKnown RBP2.53□□□□□ -2
PRE8YML092C YFR010W-AP0C5N0 62 aa2.53□□□□□ -2
PRE8YML092C GCY1P14065 312 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PRE8YML092C SRV2P17555 526 aaKnown RBP2.53□□□□□ -2
PRE8YML092C IDH2P28241 369 aaKnown RBP2.53□□□□□ -2
PRE8YML092C HSP150P32478 413 aa2.53□□□□□ -2
PRE8YML092C SNU114P36048 1008 aaKnown RBP2.53□□□□□ -2
PRE8YML092C ETR1P38071 380 aa2.53□□□□□ -2
PRE8YML092C MAL32P38158 584 aa2.53□□□□□ -2
PRE8YML092C IFA38P38286 347 aa2.53□□□□□ -2
PRE8YML092C YMR262WP38430 313 aa2.53□□□□□ -2
PRE8YML092C PTH1P38876 190 aaKnown RBP2.53□□□□□ -2
PRE8YML092C CCT2P39076 527 aaKnown RBP2.53□□□□□ -2
PRE8YML092C COA1P40452 197 aa2.53□□□□□ -2
PRE8YML092C YNL320WP42840 284 aa2.53□□□□□ -2
PRE8YML092C MNN5P46982 586 aa2.53□□□□□ -2
PRE8YML092C YJR141WP47172 347 aaPredicted RBP2.53□□□□□ -2
PRE8YML092C PGU1P47180 361 aa2.53□□□□□ -2
PRE8YML092C UPF3P48412 387 aaKnown RBP2.53□□□□□ -2
PRE8YML092C PUS4P48567 403 aaKnown RBP2.53□□□□□ -2
PRE8YML092C APT1P49435 187 aaKnown RBP2.53□□□□□ -2
PRE8YML092C ATP22P50273 684 aaPredicted RBP2.53□□□□□ -2
PRE8YML092C CDH1P53197 566 aa2.53□□□□□ -2
PRE8YML092C TPC1P53257 314 aa2.53□□□□□ -2
PRE8YML092C IBD2P53892 351 aa2.53□□□□□ -2
PRE8YML092C RPL22BP56628 122 aaKnown RBP2.53□□□□□ -2
PRE8YML092C RMI1Q02685 241 aa2.53□□□□□ -2
PRE8YML092C YMR209CQ03648 457 aa2.53□□□□□ -2
PRE8YML092C HPT1Q04178 221 aaKnown RBP2.53□□□□□ -2
PRE8YML092C YMR027WQ04371 470 aa2.53□□□□□ -2
PRE8YML092C API2Q04413 109 aa2.53□□□□□ -2
PRE8YML092C SWF1Q04629 336 aa2.53□□□□□ -2
PRE8YML092C FAR10Q06001 478 aa2.53□□□□□ -2
PRE8YML092C SEI1Q06058 285 aa2.53□□□□□ -2
PRE8YML092C YLL007CQ07799 665 aa2.53□□□□□ -2
PRE8YML092C SRL1Q08673 210 aa2.53□□□□□ -2
PRE8YML092C RRG7Q08774 242 aaPredicted RBP2.53□□□□□ -2
PRE8YML092C NMD4Q12129 218 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms